RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 B4DLN1 442 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 RNF225M0QZC1 329 aaPredicted RBP19.98■□□□□ 0.79
VARS2-206ENST00000473916 PES1O00541 588 aaKnown RBP19.98■□□□□ 0.79
VARS2-206ENST00000473916 CCND2P30279 289 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 UBXN1Q04323 297 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 UGCGQ16739 394 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 ZCWPW2Q504Y3 356 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 C1orf186Q6ZWK4 172 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 PROCA1Q8NCQ7 364 aaPredicted RBP19.98■□□□□ 0.79
VARS2-206ENST00000473916 NOC3LQ8WTT2 800 aaKnown RBP19.98■□□□□ 0.79
VARS2-206ENST00000473916 TUBGCP2Q9BSJ2 902 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 PAGR1Q9BTK6 254 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 TRMT1Q9NXH9 659 aaKnown RBP19.98■□□□□ 0.79
VARS2-206ENST00000473916 MAGEC2Q9UBF1 373 aaPredicted RBP19.98■□□□□ 0.79
VARS2-206ENST00000473916 KCNH4Q9UQ05 1017 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 CLEC11AQ9Y240 323 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 SAMM50Q9Y512 469 aa19.98■□□□□ 0.79
VARS2-206ENST00000473916 TMEM150BA6NC51 233 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 IQCA1LA6NCM1 817 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 LGALS16A8MUM7 142 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 GYPCP04921 128 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 MYBP10242 640 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 PRKCSHP14314 528 aaPredicted RBP19.97■□□□□ 0.79
VARS2-206ENST00000473916 HOXA7P31268 230 aaPredicted RBP19.97■□□□□ 0.79
VARS2-206ENST00000473916 NSUN6Q8TEA1 469 aaKnown RBP19.97■□□□□ 0.79
VARS2-206ENST00000473916 SH2D3AQ9BRG2 576 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 SORBS3O60504 671 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 CNMDO75829 334 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 FXR1P51114 621 aaKnown RBP eCLIP19.97■□□□□ 0.79
VARS2-206ENST00000473916 IRX3P78415 501 aaPredicted RBP19.97■□□□□ 0.79
VARS2-206ENST00000473916 PPIL2Q13356 520 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 MIIPQ5JXC2 388 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 E4F1Q66K89 784 aaPredicted RBP19.97■□□□□ 0.79
VARS2-206ENST00000473916 TRMT1LQ7Z2T5 733 aaKnown RBP19.97■□□□□ 0.79
VARS2-206ENST00000473916 ZNF507Q8TCN5 953 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 TXNRD2Q9NNW7 524 aa19.97■□□□□ 0.79
VARS2-206ENST00000473916 CXCL11O14625 94 aa19.96■□□□□ 0.79
VARS2-206ENST00000473916 GRIN3BO60391 1043 aa19.96■□□□□ 0.79
VARS2-206ENST00000473916 CASP14P31944 242 aa19.96■□□□□ 0.79
VARS2-206ENST00000473916 HOXD13P35453 343 aa19.96■□□□□ 0.79
VARS2-206ENST00000473916 DNTTIP2Q5QJE6 756 aaKnown RBP19.96■□□□□ 0.79
VARS2-206ENST00000473916 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.96■□□□□ 0.79
VARS2-206ENST00000473916 C16orf45Q96MC5 204 aaPredicted RBP19.96■□□□□ 0.79
VARS2-206ENST00000473916 INPP4AQ96PE3 977 aaPredicted RBP19.96■□□□□ 0.79
VARS2-206ENST00000473916 NACC1Q96RE7 527 aa19.96■□□□□ 0.79
VARS2-206ENST00000473916 KCTD10Q9H3F6 313 aa19.96■□□□□ 0.79
VARS2-206ENST00000473916 MTIF2P46199 727 aaKnown RBP19.95■□□□□ 0.78
VARS2-206ENST00000473916 HERVK_113P62684 666 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 LRRC63Q05C16 580 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 ARMC9Q7Z3E5 817 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 MB21D1Q8N884 522 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 SPATC1LQ9H0A9 340 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 TBC1D22BQ9NU19 505 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 AGTPBP1Q9UPW5 1226 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 TBCAO75347 108 aaKnown RBP19.95■□□□□ 0.78
VARS2-206ENST00000473916 KLK7P49862 253 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 CCAR2Q8N163 923 aaKnown RBP19.95■□□□□ 0.78
VARS2-206ENST00000473916 ANKRD35Q8N283 1001 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 IKZF4Q9H2S9 585 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 ITIH6Q6UXX5 1313 aa19.95■□□□□ 0.78
VARS2-206ENST00000473916 AKR1B15C9JRZ8 316 aaPredicted RBP19.94■□□□□ 0.78
VARS2-206ENST00000473916 PRPF6O94906 941 aaKnown RBP19.94■□□□□ 0.78
VARS2-206ENST00000473916 P4HBP07237 508 aaKnown RBP19.94■□□□□ 0.78
VARS2-206ENST00000473916 KCNA1Q09470 495 aa19.94■□□□□ 0.78
VARS2-206ENST00000473916 LDLRAD1Q5T700 205 aa19.94■□□□□ 0.78
VARS2-206ENST00000473916 EPM2AIP1Q7L775 607 aaPredicted RBP19.94■□□□□ 0.78
VARS2-206ENST00000473916 NCAPG2Q86XI2 1143 aa19.94■□□□□ 0.78
VARS2-206ENST00000473916 RIOX2Q8IUF8 465 aa19.94■□□□□ 0.78
VARS2-206ENST00000473916 CHST13Q8NET6 341 aa19.94■□□□□ 0.78
VARS2-206ENST00000473916 KCNA2P16389 499 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 MUTP22033 750 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 GPAT2Q6NUI2 795 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 PNMA8AQ86V59 439 aaPredicted RBP19.93■□□□□ 0.78
VARS2-206ENST00000473916 PPFIBP1Q86W92 1011 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 FAM114A1Q8IWE2 563 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 GPRASP2Q96D09 838 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 TSG101Q99816 390 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 BAG1Q99933 345 aaPredicted RBP19.93■□□□□ 0.78
VARS2-206ENST00000473916 NOC4LQ9BVI4 516 aaKnown RBP19.93■□□□□ 0.78
VARS2-206ENST00000473916 MOV10L1Q9BXT6 1211 aaKnown RBP19.93■□□□□ 0.78
VARS2-206ENST00000473916 MRPL44Q9H9J2 332 aaKnown RBP19.93■□□□□ 0.78
VARS2-206ENST00000473916 R3HCC1Q9Y3T6 440 aaKnown RBP19.93■□□□□ 0.78
VARS2-206ENST00000473916 MFAP3LO75121 409 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 NMT1P30419 496 aaKnown RBP19.93■□□□□ 0.78
VARS2-206ENST00000473916 SP4Q02446 784 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 XRRA1Q6P2D8 792 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 MAEAQ7L5Y9 396 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 KSR1Q8IVT5 923 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 NEK9Q8TD19 979 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 ZSWIM4Q9H7M6 989 aa19.93■□□□□ 0.78
VARS2-206ENST00000473916 LRRC37A2A6NM11 1700 aa19.92■□□□□ 0.78
VARS2-206ENST00000473916 ARHGEF35A5YM69 484 aa19.92■□□□□ 0.78
VARS2-206ENST00000473916 QARSP47897 775 aaKnown RBP19.92■□□□□ 0.78
VARS2-206ENST00000473916 MKRN3Q13064 507 aaKnown RBP19.92■□□□□ 0.78
VARS2-206ENST00000473916 Q3C1V9 767 aa19.92■□□□□ 0.78
VARS2-206ENST00000473916 UTP14CQ5TAP6 766 aaKnown RBP19.92■□□□□ 0.78
VARS2-206ENST00000473916 KCTD17Q8N5Z5 321 aa19.92■□□□□ 0.78
VARS2-206ENST00000473916 MYCT1Q8N699 235 aa19.92■□□□□ 0.78
VARS2-206ENST00000473916 CCDC112Q8NEF3 446 aa19.92■□□□□ 0.78
VARS2-206ENST00000473916 COL4A3BPQ9Y5P4 624 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms