RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PPFIA3O75145 1194 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 DNAJC8O75937 253 aaPredicted RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 ABL1P00519 1130 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 KRT9P35527 623 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 RWDD2BP57060 319 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 MB21D2Q8IYB1 491 aaPredicted RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 GSPT2Q8IYD1 628 aaKnown RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 NCOA7Q8NI08 942 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 ZNF483Q8TF39 744 aaPredicted RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 USP6NLQ92738 828 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 ARL8AQ96BM9 186 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 FAM210AQ96ND0 272 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 GSDMAQ96QA5 445 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 CDX2Q99626 313 aaPredicted RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 PRDM6Q9NQX0 595 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 ETAA1Q9NY74 926 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 FBXO2Q9UK22 296 aaPredicted RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 TPX2Q9ULW0 747 aaKnown RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 REXO2Q9Y3B8 237 aaKnown RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 COL2A1P02458 1487 aaPredicted RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 STK36Q9NRP7 1315 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 N4BP3O15049 544 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 POLR2DO15514 142 aaKnown RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 RNF113AO15541 343 aaKnown RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 MGRN1O60291 552 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 NR1D1P20393 614 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 JAG1P78504 1218 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 IFT88Q13099 833 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 NAA25Q14CX7 972 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 CFAP58Q5T655 872 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 CCDC170Q8IYT3 715 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 WASF1Q92558 559 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 TATDN2Q93075 761 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 RNPC3Q96LT9 517 aaKnown RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
APTX-216ENST00000472896 RABEP2Q9H5N1 569 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 SLC24A3Q9HC58 644 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 PAG1Q9NWQ8 432 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 CEP126Q9P2H0 1117 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 RBPJLQ9UBG7 517 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 HDAC6Q9UBN7 1215 aa11.11□□□□□ -0.63
APTX-216ENST00000472896 GPR75-ASB3A0A0A6YYF3 556 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 LIN7AO14910 233 aaPredicted RBP11.1□□□□□ -0.63
APTX-216ENST00000472896 CAP2P40123 477 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 COPB1P53618 953 aaKnown RBP11.1□□□□□ -0.63
APTX-216ENST00000472896 RBBP5Q15291 538 aaKnown RBP11.1□□□□□ -0.63
APTX-216ENST00000472896 RILPL1Q5EBL4 403 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 SPECC1Q5M775 1068 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 FAM228AQ86W67 206 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 STK11IPQ8N1F8 1099 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.1□□□□□ -0.63
APTX-216ENST00000472896 CCDC47Q96A33 483 aaKnown RBP11.1□□□□□ -0.63
APTX-216ENST00000472896 CAPZA3Q96KX2 299 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 GDAP1L1Q96MZ0 367 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 ZIM3Q96PE6 472 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 DNAJC7Q99615 494 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 SEMA6BQ9H3T3 888 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 GPR108Q9NPR9 543 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 ABCF2Q9UG63 623 aa11.1□□□□□ -0.63
APTX-216ENST00000472896 SRPRBQ9Y5M8 271 aaKnown RBP11.1□□□□□ -0.63
APTX-216ENST00000472896 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 C5orf60A6NFR6 353 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 USP17L5A8MUK1 530 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 ENC1O14682 589 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 ZMYND10O75800 440 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 TCP1P17987 556 aaKnown RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 GCKP35557 465 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 CCNHP51946 323 aaPredicted RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 VAV2P52735 878 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 HERVK_113P62684 666 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 C2orf54Q08AI8 447 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 TFCP2Q12800 502 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 TRAF1Q13077 416 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
APTX-216ENST00000472896 RIPK1Q13546 671 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 RASGRF1Q13972 1273 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 KRT31Q15323 416 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 ANKRD20A8PQ5CZ79 823 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 MORN1Q5T089 497 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 CDCA2Q69YH5 1023 aaPredicted RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 CHST3Q7LGC8 479 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 SH3RF1Q7Z6J0 888 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 RALYLQ86SE5 291 aaKnown RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 DZIP1Q86YF9 867 aaKnown RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 IFT20Q8IY31 132 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 IQCKQ8N0W5 287 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
APTX-216ENST00000472896 GPRC5AQ8NFJ5 357 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
APTX-216ENST00000472896 SAAL1Q96ER3 474 aa11.09□□□□□ -0.63
APTX-216ENST00000472896 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms