RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 GRIK4Q16099 956 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 KRT40Q6A162 431 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 FAM117BQ6P1L5 589 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 RUFY4Q6ZNE9 571 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 APBB2Q92870 758 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 BRF1Q92994 677 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 TOP1MTQ969P6 601 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 TGS1Q96RS0 853 aaKnown RBP17.46■□□□□ 0.39
VTI1A-203ENST00000472892 SDF4Q9BRK5 362 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 SUGCTQ9HAC7 445 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 AGO4Q9HCK5 861 aaKnown RBP17.46■□□□□ 0.39
VTI1A-203ENST00000472892 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 NAP1L2Q9ULW6 460 aaPredicted RBP17.46■□□□□ 0.39
VTI1A-203ENST00000472892 NID2Q14112 1375 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.45■□□□□ 0.38
VTI1A-203ENST00000472892 PRPF3O43395 683 aaKnown RBP17.45■□□□□ 0.38
VTI1A-203ENST00000472892 REC8O95072 547 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 ATG7O95352 703 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 SCG2P13521 617 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 RPS6KB1P23443 525 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 ACTR2P61160 394 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 ITGB3BPQ13352 177 aaPredicted RBP17.45■□□□□ 0.38
VTI1A-203ENST00000472892 NIPA1Q7RTP0 329 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 PLPPR4Q7Z2D5 763 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 MYOCDQ8IZQ8 938 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 SP7Q8TDD2 431 aaPredicted RBP17.45■□□□□ 0.38
VTI1A-203ENST00000472892 CRYGNQ8WXF5 182 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 AZI2Q9H6S1 392 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 TUBE1Q9UJT0 475 aa17.45■□□□□ 0.38
VTI1A-203ENST00000472892 REV3LO60673 3130 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 ESYT2A0FGR8 921 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 RRN3P2A6NIE6 340 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 CYP3A4P08684 503 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 INSRRP14616 1297 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 PSMA5P28066 241 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 MGAT3Q09327 533 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 PKN1Q16512 942 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 TNPO1Q92973 898 aaKnown RBP17.44■□□□□ 0.38
VTI1A-203ENST00000472892 IFIH1Q9BYX4 1025 aaKnown RBP17.44■□□□□ 0.38
VTI1A-203ENST00000472892 ZMYND12Q9H0C1 365 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 TTC28Q96AY4 2481 aa17.44■□□□□ 0.38
VTI1A-203ENST00000472892 PRRC2BQ5JSZ5 2229 aaKnown RBP17.44■□□□□ 0.38
VTI1A-203ENST00000472892 XIRP2A4UGR9 3374 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 IGKV6D-21A0A0A0MT36 114 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 EPB41L2O43491 1005 aaKnown RBP17.43■□□□□ 0.38
VTI1A-203ENST00000472892 RPLP2P05387 115 aaKnown RBP17.43■□□□□ 0.38
VTI1A-203ENST00000472892 ZNF76P36508 570 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 STAT5BP51692 787 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 EVCP57679 992 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 SKIV2LQ15477 1246 aaKnown RBP17.43■□□□□ 0.38
VTI1A-203ENST00000472892 NTRK3Q16288 839 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 JAKMIP3Q5VZ66 844 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 DNAJB3Q8WWF6 145 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 C6orf50Q9HD87 102 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 MTUS1Q9ULD2 1270 aa17.43■□□□□ 0.38
VTI1A-203ENST00000472892 MUC3AQ02505 3323 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 FAM86B1E9PN63 330 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 CCNE2O96020 404 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 FAM86B2P0C5J1 330 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 BMP1P13497 986 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 TFF2Q03403 129 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 LPIN1Q14693 890 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 PLCB4Q15147 1175 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 AAK1Q2M2I8 961 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 GDPD5Q8WTR4 605 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 CCDC12Q8WUD4 166 aaPredicted RBP17.42■□□□□ 0.38
VTI1A-203ENST00000472892 C17orf80Q9BSJ5 609 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 COG5Q9UP83 839 aa17.42■□□□□ 0.38
VTI1A-203ENST00000472892 IGLV3-22A0A075B6J6 115 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 TNFRSF10AO00220 468 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 DHX15O43143 795 aaKnown RBP17.41■□□□□ 0.38
VTI1A-203ENST00000472892 UPP2O95045 317 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 GHRP10912 638 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 GNA11P29992 359 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 PDIA3P30101 505 aaKnown RBP17.41■□□□□ 0.38
VTI1A-203ENST00000472892 SLC26A2P50443 739 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 IGBP1P78318 339 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 FBXO47Q5MNV8 452 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 ABHD15Q6UXT9 468 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 PLA2G4DQ86XP0 818 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 ADAMTS19Q8TE59 1207 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 PHKBQ93100 1093 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 ZBTB10Q96DT7 871 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 TRPC6Q9Y210 931 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 PCDHA2Q9Y5H9 948 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 MICAL3Q7RTP6 2002 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 KAT6AQ92794 2004 aa17.41■□□□□ 0.38
VTI1A-203ENST00000472892 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 ENPP3O14638 875 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 IFNAR1P17181 557 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 MRPS6P82932 125 aaKnown RBP17.4■□□□□ 0.38
VTI1A-203ENST00000472892 IER5Q5VY09 327 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 RUFY3Q7L099 469 aa17.4■□□□□ 0.38
VTI1A-203ENST00000472892 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms