RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 CPA1P15085 419 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 RPS6KB1P23443 525 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 PSMA5P28066 241 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 SREBF1P36956 1147 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 ADAM17P78536 824 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 MRPS5P82675 430 aaKnown RBP10.18□□□□□ -0.78
CHEK2-223ENST00000472807 AKAP17AQ02040 695 aaKnown RBP10.18□□□□□ -0.78
CHEK2-223ENST00000472807 SKIV2LQ15477 1246 aaKnown RBP10.18□□□□□ -0.78
CHEK2-223ENST00000472807 GRIK4Q16099 956 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 PFKFB3Q16875 520 aaPredicted RBP10.18□□□□□ -0.78
CHEK2-223ENST00000472807 FAM117BQ6P1L5 589 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 TNPO1Q92973 898 aaKnown RBP10.18□□□□□ -0.78
CHEK2-223ENST00000472807 PGBD1Q96JS3 809 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 TGS1Q96RS0 853 aaKnown RBP10.18□□□□□ -0.78
CHEK2-223ENST00000472807 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
CHEK2-223ENST00000472807 TRPC6Q9Y210 931 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 INSL6Q9Y581 213 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 SNX14Q9Y5W7 946 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 MTCH2Q9Y6C9 303 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 BRWD1Q9NSI6 2320 aa10.18□□□□□ -0.78
CHEK2-223ENST00000472807 SIP14410 1827 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 POU3F3P20264 500 aaPredicted RBP10.17□□□□□ -0.78
CHEK2-223ENST00000472807 ADD1P35611 737 aaKnown RBP10.17□□□□□ -0.78
CHEK2-223ENST00000472807 ZNF76P36508 570 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 CLK2P49760 499 aaKnown RBP10.17□□□□□ -0.78
CHEK2-223ENST00000472807 ACTR2P61160 394 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 GRB10Q13322 594 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 FAM26DQ5JW98 314 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHEK2-223ENST00000472807 RUFY4Q6ZNE9 571 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 NIPA1Q7RTP0 329 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 RPAINQ86UA6 219 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 REXO1Q8N1G1 1221 aaKnown RBP10.17□□□□□ -0.78
CHEK2-223ENST00000472807 FBXL16Q8N461 479 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 CYP2W1Q8TAV3 490 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 GDPD5Q8WTR4 605 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 ASB2Q96Q27 587 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 YME1L1Q96TA2 773 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 IFIH1Q9BYX4 1025 aaKnown RBP10.17□□□□□ -0.78
CHEK2-223ENST00000472807 AGO4Q9HCK5 861 aaKnown RBP10.17□□□□□ -0.78
CHEK2-223ENST00000472807 C6orf50Q9HD87 102 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 TMEM260Q9NX78 707 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 MTUS1Q9ULD2 1270 aa10.17□□□□□ -0.78
CHEK2-223ENST00000472807 ESYT2A0FGR8 921 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 MBLAC1A4D2B0 266 aaPredicted RBP10.16□□□□□ -0.78
CHEK2-223ENST00000472807 LINC01553A4QN01 128 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 RRN3P2A6NIE6 340 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 MEIS1O00470 390 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 ARP10275 920 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 GHRP10912 638 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 GNA11P29992 359 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 ERVK-21P61565 698 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 IGBP1P78318 339 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
CHEK2-223ENST00000472807 ITGB3BPQ13352 177 aaPredicted RBP10.16□□□□□ -0.78
CHEK2-223ENST00000472807 AAK1Q2M2I8 961 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 JAKMIP3Q5VZ66 844 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 MCTP2Q6DN12 878 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 PLPPR4Q7Z2D5 763 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 SPRED2Q7Z698 418 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 CCDC148Q8NFR7 591 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 BICD2Q8TD16 824 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 TCEAL9Q9UHQ7 104 aa10.16□□□□□ -0.78
CHEK2-223ENST00000472807 M0QZ92 97 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 BACH1O14867 736 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 PRPF3O43395 683 aaKnown RBP10.15□□□□□ -0.78
CHEK2-223ENST00000472807 EPB41L2O43491 1005 aaKnown RBP10.15□□□□□ -0.78
CHEK2-223ENST00000472807 UPP2O95045 317 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 CHRNA1P02708 482 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 INSRRP14616 1297 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 SLC26A2P50443 739 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 STAT5BP51692 787 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 HTRA4P83105 476 aaPredicted RBP10.15□□□□□ -0.78
CHEK2-223ENST00000472807 FAM160B1Q5W0V3 765 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 KRT40Q6A162 431 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 PLA2G4DQ86XP0 818 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 FBXO22Q8NEZ5 403 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 ADAMTS19Q8TE59 1207 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 DNAJB3Q8WWF6 145 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 PHKBQ93100 1093 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 TOP1MTQ969P6 601 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 PCYT2Q99447 389 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 SLC26A6Q9BXS9 759 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 RNF26Q9BY78 433 aaPredicted RBP10.15□□□□□ -0.78
CHEK2-223ENST00000472807 AGXT2Q9BYV1 514 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 ZMYND12Q9H0C1 365 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 FAM49AQ9H0Q0 323 aaPredicted RBP10.15□□□□□ -0.78
CHEK2-223ENST00000472807 LMCD1Q9NZU5 365 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 COG5Q9UP83 839 aa10.15□□□□□ -0.78
CHEK2-223ENST00000472807 COL4A6Q14031 1691 aa10.15□□□□□ -0.79
CHEK2-223ENST00000472807 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.14□□□□□ -0.79
CHEK2-223ENST00000472807 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
CHEK2-223ENST00000472807 FAM86B1E9PN63 330 aa10.14□□□□□ -0.79
CHEK2-223ENST00000472807 RBAK-RBAKDNI3L0D1 243 aa10.14□□□□□ -0.79
CHEK2-223ENST00000472807 DDX39AO00148 427 aaKnown RBP10.14□□□□□ -0.79
CHEK2-223ENST00000472807 TNFRSF10AO00220 468 aa10.14□□□□□ -0.79
CHEK2-223ENST00000472807 IPO5O00410 1097 aaKnown RBP10.14□□□□□ -0.79
CHEK2-223ENST00000472807 LPXNO60711 386 aa10.14□□□□□ -0.79
CHEK2-223ENST00000472807 CYP3A4P08684 503 aa10.14□□□□□ -0.79
CHEK2-223ENST00000472807 FAM86B2P0C5J1 330 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms