RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 NGRNQ9NPE2 291 aaKnown RBP6.64□□□□□ -1.35
PRPF40A-208ENST00000472760 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 LRRC10BA6NIK2 292 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 TGM5O43548 720 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 PEX10O60683 326 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 RAB11FIP3O75154 756 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 KATNA1O75449 491 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 LRG1P02750 347 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 ASGR2P07307 311 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 PDGFRBP09619 1106 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 NCAM1P13591 858 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 TAL1P17542 331 aaPredicted RBP6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 SDHAP31040 664 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 LSP1P33241 339 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 STAT5AP42229 794 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 HERVK_113P62684 666 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 NKX3-2P78367 333 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 ITKQ08881 620 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 FAPQ12884 760 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 TARBP2Q15633 366 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 BRDTQ58F21 947 aaPredicted RBP6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 BROXQ5VW32 411 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 CD300LDQ6UXZ3 194 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 ZC3H18Q86VM9 953 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 ZZZ3Q8IYH5 903 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 COG1Q8WTW3 980 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 STAG1Q8WVM7 1258 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 PLA2G2DQ9UNK4 145 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 WASHC2CQ9Y4E1 1318 aa6.63□□□□□ -1.35
PRPF40A-208ENST00000472760 PTX3P26022 381 aaPredicted RBP6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 SESN3P58005 492 aa6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 SMAD3P84022 425 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 EXOSC10Q01780 885 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 SMAD2Q15796 467 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 TEPPQ6URK8 271 aa6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 LDHDQ86WU2 507 aa6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 HIPK4Q8NE63 616 aa6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 GBP4Q96PP9 640 aa6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 RNF38Q9H0F5 515 aa6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 ARHGAP28Q9P2N2 729 aa6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 NOC2LQ9Y3T9 749 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-208ENST00000472760 MYOCOSA0A1B0GUC4 107 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 MMEP08473 750 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 PFKLP17858 780 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 CD40P25942 277 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 FNTBP49356 437 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 NCKAP1LP55160 1127 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 CACNB2Q08289 660 aaPredicted RBP6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 DBPQ10586 325 aaPredicted RBP6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 TERF2Q15554 542 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 GPR158Q5T848 1215 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 FAM26EQ8N5C1 309 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 CNTD1Q8N815 330 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 ASB15Q8WXK1 588 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 CPA5Q8WXQ8 436 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 ERCC4Q92889 916 aaPredicted RBP6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 MTMR8Q96EF0 704 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 MCOLN1Q9GZU1 580 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 KCNK12Q9HB15 430 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 FAN1Q9Y2M0 1017 aa6.61□□□□□ -1.35
PRPF40A-208ENST00000472760 TEX51A0A1B0GUA7 166 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 PRKD3O94806 890 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 PHC1P78364 1004 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 ADCY1Q08828 1119 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 MTMR1Q13613 665 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 LRRC32Q14392 662 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 EPHA7Q15375 998 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 CR1LQ2VPA4 569 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 PLEKHG6Q3KR16 790 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 CD276Q5ZPR3 534 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 RASSF3Q86WH2 238 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 NME9Q86XW9 330 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 ZNF610Q8N9Z0 462 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 CLRN3Q8NCR9 226 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 AHCYL2Q96HN2 611 aaKnown RBP6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 HSPBP1Q9NZL4 362 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 MBD1Q9UIS9 605 aaPredicted RBP6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 ASB1Q9Y576 335 aa6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
PRPF40A-208ENST00000472760 IRS2Q9Y4H2 1338 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 PRAMEF22A3QJZ6 481 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 S100BP04271 92 aaPredicted RBP6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 CYP2C8P10632 490 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 FBLN1P23142 703 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 MC3RP41968 323 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 CDR1P51861 262 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 RGL3Q3MIN7 710 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 PRAMEF18Q5VWM3 479 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 VASNQ6EMK4 673 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 ESRP1Q6NXG1 681 aaKnown RBP6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 FBXO15Q8NCQ5 510 aaPredicted RBP6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 MZB1Q8WU39 189 aa6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 RTF1Q92541 710 aaKnown RBP6.59□□□□□ -1.35
PRPF40A-208ENST00000472760 E2F7Q96AV8 911 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms