RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.49□□□□□ -0.73
SMC4-213ENST00000472282 CPLX1O14810 134 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMC4-213ENST00000472282 IFNAR1P17181 557 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 CPT1AP50416 773 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 GHRHRQ02643 423 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 TTLL4Q14679 1199 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 MCF2L2Q86YR7 1114 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 SNIP1Q8TAD8 396 aaKnown RBP10.49□□□□□ -0.73
SMC4-213ENST00000472282 NSUN6Q8TEA1 469 aaKnown RBP10.49□□□□□ -0.73
SMC4-213ENST00000472282 AFG1LQ8WV93 481 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 GPKOWQ92917 476 aaPredicted RBP eCLIP10.49□□□□□ -0.734e-13■□□□□ 10.3
SMC4-213ENST00000472282 GTF3C6Q969F1 213 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 REPIN1Q9BWE0 567 aaKnown RBP10.49□□□□□ -0.73
SMC4-213ENST00000472282 SLC26A6Q9BXS9 759 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 LIMCH1Q9UPQ0 1083 aa10.49□□□□□ -0.73
SMC4-213ENST00000472282 MYO9BQ13459 2157 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 SORBS3O60504 671 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 DTNBO60941 627 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 DXOO77932 396 aaKnown RBP10.48□□□□□ -0.73
SMC4-213ENST00000472282 NR3C2P08235 984 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 MMP3P08254 477 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 AKAP17AQ02040 695 aaKnown RBP10.48□□□□□ -0.73
SMC4-213ENST00000472282 ST3GAL1Q11201 340 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 TRAF1Q13077 416 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 GRIN2CQ14957 1233 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 STXBP2Q15833 593 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 FAM47CQ5HY64 1035 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 ARHGEF16Q5VV41 709 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 WWC2Q6AWC2 1192 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 CPLX2Q6PUV4 134 aaKnown RBP10.48□□□□□ -0.73
SMC4-213ENST00000472282 OTOP2Q7RTS6 562 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 HEATR3Q7Z4Q2 680 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
SMC4-213ENST00000472282 KAT2BQ92831 832 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 CTAGE1Q96RT6 745 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 MPHOSPH6Q99547 160 aaKnown RBP10.48□□□□□ -0.73
SMC4-213ENST00000472282 PDCD2LQ9BRP1 358 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 RNF26Q9BY78 433 aaPredicted RBP10.48□□□□□ -0.73
SMC4-213ENST00000472282 PBX4Q9BYU1 374 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 DDX41Q9UJV9 622 aaKnown RBP10.48□□□□□ -0.73
SMC4-213ENST00000472282 SIP14410 1827 aa10.48□□□□□ -0.73
SMC4-213ENST00000472282 B4DLN1 442 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 PRPF3O43395 683 aaKnown RBP10.47□□□□□ -0.73
SMC4-213ENST00000472282 GH1P01241 217 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
SMC4-213ENST00000472282 SCG2P13521 617 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 CLCN1P35523 988 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 MRPL12P52815 198 aaKnown RBP10.47□□□□□ -0.73
SMC4-213ENST00000472282 NAPAP54920 295 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 CHMP4BP1P59074 171 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 SSRP1Q08945 709 aaKnown RBP10.47□□□□□ -0.73
SMC4-213ENST00000472282 PGM5Q15124 567 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 PKN1Q16512 942 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 PSRC1Q6PGN9 363 aaPredicted RBP10.47□□□□□ -0.73
SMC4-213ENST00000472282 CCDC83Q8IWF9 413 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 HERVK_113Q902F9 699 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 IWS1Q96ST2 819 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 MAF1Q9H063 256 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 BCAS3Q9H6U6 928 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 STK17AQ9UEE5 414 aa10.47□□□□□ -0.73
SMC4-213ENST00000472282 COL4A4P53420 1690 aaPredicted RBP10.47□□□□□ -0.73
SMC4-213ENST00000472282 KAT6AQ92794 2004 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 hCG_1984214I3L0E3 225 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 STXBP3O00186 592 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 DLL1O00548 723 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.73
SMC4-213ENST00000472282 CDKL5O76039 1030 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 DEXIO95424 95 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 CTDNEP1O95476 244 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 FGBP02675 491 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 SP2Q02086 613 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 PFKFB3Q16875 520 aaPredicted RBP10.46□□□□□ -0.73
SMC4-213ENST00000472282 GDF6Q6KF10 455 aaPredicted RBP10.46□□□□□ -0.73
SMC4-213ENST00000472282 NFRKBQ6P4R8 1299 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 DEFB128Q7Z7B8 93 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 FCHSD1Q86WN1 690 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 ZNF713Q8N859 430 aaPredicted RBP10.46□□□□□ -0.73
SMC4-213ENST00000472282 IL27Q8NEV9 243 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 TIFAQ96CG3 184 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 ZSCAN31Q96LW9 406 aaPredicted RBP10.46□□□□□ -0.73
SMC4-213ENST00000472282 SEZ6LQ9BYH1 1024 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 ZNF576Q9H609 170 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 SH2B1Q9NRF2 756 aaPredicted RBP10.46□□□□□ -0.73
SMC4-213ENST00000472282 YBX2Q9Y2T7 364 aaKnown RBP10.46□□□□□ -0.73
SMC4-213ENST00000472282 TELO2Q9Y4R8 837 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 MRVI1Q9Y6F6 885 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 STK36Q9NRP7 1315 aa10.46□□□□□ -0.73
SMC4-213ENST00000472282 LOXHD1Q8IVV2 1947 aa10.46□□□□□ -0.74
SMC4-213ENST00000472282 MICAL3Q7RTP6 2002 aa10.46□□□□□ -0.74
SMC4-213ENST00000472282 LAMA2P24043 3122 aaKnown RBP10.45□□□□□ -0.74
SMC4-213ENST00000472282 WDR81Q562E7 1941 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 TMEM265A0A087WTH1 108 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 HOXA2O43364 376 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 JAK2O60674 1132 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 KPNA6O60684 536 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 ZNF286BP0CG31 522 aa10.45□□□□□ -0.74
SMC4-213ENST00000472282 MYOGP15173 224 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms