RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HTRA4P83105 476 aaPredicted RBP25.73■■□□□ 1.71
C9orf3-213ENST00000471978 PFKFB3Q16875 520 aaPredicted RBP25.73■■□□□ 1.71
C9orf3-213ENST00000471978 RSPH3Q86UC2 560 aa25.73■■□□□ 1.71
C9orf3-213ENST00000471978 APBB2Q92870 758 aa25.73■■□□□ 1.71
C9orf3-213ENST00000471978 PCYT2Q99447 389 aa25.73■■□□□ 1.71
C9orf3-213ENST00000471978 IFIH1Q9BYX4 1025 aaKnown RBP25.73■■□□□ 1.71
C9orf3-213ENST00000471978 AZI2Q9H6S1 392 aa25.73■■□□□ 1.71
C9orf3-213ENST00000471978 SUGCTQ9HAC7 445 aa25.73■■□□□ 1.71
C9orf3-213ENST00000471978 BDP1A6H8Y1 2624 aa25.72■■□□□ 1.71
C9orf3-213ENST00000471978 COL4A4P53420 1690 aaPredicted RBP25.72■■□□□ 1.71
C9orf3-213ENST00000471978 IGBP1P78318 339 aa25.72■■□□□ 1.71
C9orf3-213ENST00000471978 TFF2Q03403 129 aa25.72■■□□□ 1.71
C9orf3-213ENST00000471978 MARCH8Q5T0T0 291 aa25.72■■□□□ 1.71
C9orf3-213ENST00000471978 ADAMTS19Q8TE59 1207 aa25.72■■□□□ 1.71
C9orf3-213ENST00000471978 TOP1MTQ969P6 601 aa25.72■■□□□ 1.71
C9orf3-213ENST00000471978 AGO4Q9HCK5 861 aaKnown RBP25.72■■□□□ 1.71
C9orf3-213ENST00000471978 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.71■■□□□ 1.71
C9orf3-213ENST00000471978 MBLAC1A4D2B0 266 aaPredicted RBP25.71■■□□□ 1.71
C9orf3-213ENST00000471978 TNFRSF10AO00220 468 aa25.71■■□□□ 1.71
C9orf3-213ENST00000471978 MEIS1O00470 390 aa25.71■■□□□ 1.71
C9orf3-213ENST00000471978 UPP2O95045 317 aa25.71■■□□□ 1.71
C9orf3-213ENST00000471978 SCG2P13521 617 aa25.71■■□□□ 1.71
C9orf3-213ENST00000471978 ZNF76P36508 570 aa25.71■■□□□ 1.71
C9orf3-213ENST00000471978 ACTR2P61160 394 aa25.71■■□□□ 1.71
C9orf3-213ENST00000471978 ITGB3BPQ13352 177 aaPredicted RBP25.71■■□□□ 1.71
C9orf3-213ENST00000471978 DNAJB3Q8WWF6 145 aa25.71■■□□□ 1.71
C9orf3-213ENST00000471978 LMCD1Q9NZU5 365 aa25.71■■□□□ 1.71
C9orf3-213ENST00000471978 RRN3P2A6NIE6 340 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 REC8O95072 547 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 GHRP10912 638 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 INSRRP14616 1297 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 MGAT3Q09327 533 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 AAK1Q2M2I8 961 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 JAKMIP3Q5VZ66 844 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 SP7Q8TDD2 431 aaPredicted RBP25.7■■□□□ 1.7
C9orf3-213ENST00000471978 YME1L1Q96TA2 773 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 C17orf80Q9BSJ5 609 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 TRPC6Q9Y210 931 aa25.7■■□□□ 1.7
C9orf3-213ENST00000471978 RPS6KB1P23443 525 aa25.69■■□□□ 1.7
C9orf3-213ENST00000471978 STAT5BP51692 787 aa25.69■■□□□ 1.7
C9orf3-213ENST00000471978 PLPPR4Q7Z2D5 763 aa25.69■■□□□ 1.7
C9orf3-213ENST00000471978 FBXL16Q8N461 479 aa25.69■■□□□ 1.7
C9orf3-213ENST00000471978 TNPO1Q92973 898 aaKnown RBP25.69■■□□□ 1.7
C9orf3-213ENST00000471978 UHRF1Q96T88 793 aaPredicted RBP25.69■■□□□ 1.7
C9orf3-213ENST00000471978 COG5Q9UP83 839 aa25.69■■□□□ 1.7
C9orf3-213ENST00000471978 PSMA5P28066 241 aa25.68■■□□□ 1.7
C9orf3-213ENST00000471978 LPIN1Q14693 890 aa25.68■■□□□ 1.7
C9orf3-213ENST00000471978 PLCB4Q15147 1175 aa25.68■■□□□ 1.7
C9orf3-213ENST00000471978 NIPA1Q7RTP0 329 aa25.68■■□□□ 1.7
C9orf3-213ENST00000471978 FBXO22Q8NEZ5 403 aa25.68■■□□□ 1.7
C9orf3-213ENST00000471978 CCDC12Q8WUD4 166 aaPredicted RBP25.68■■□□□ 1.7
C9orf3-213ENST00000471978 ZBTB10Q96DT7 871 aa25.68■■□□□ 1.7
C9orf3-213ENST00000471978 NID2Q14112 1375 aa25.68■■□□□ 1.7
C9orf3-213ENST00000471978 SIP14410 1827 aa25.67■■□□□ 1.7
C9orf3-213ENST00000471978 ESYT2A0FGR8 921 aa25.67■■□□□ 1.7
C9orf3-213ENST00000471978 PRPF3O43395 683 aaKnown RBP25.67■■□□□ 1.7
C9orf3-213ENST00000471978 BMP1P13497 986 aa25.67■■□□□ 1.7
C9orf3-213ENST00000471978 PKN1Q16512 942 aa25.67■■□□□ 1.7
C9orf3-213ENST00000471978 HLA-CQ95604 372 aa25.67■■□□□ 1.7
C9orf3-213ENST00000471978 ZMYND12Q9H0C1 365 aa25.67■■□□□ 1.7
C9orf3-213ENST00000471978 FAM49AQ9H0Q0 323 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-213ENST00000471978 C6orf50Q9HD87 102 aa25.67■■□□□ 1.7
C9orf3-213ENST00000471978 CDY2AQ9Y6F7 541 aa25.67■■□□□ 1.7
C9orf3-213ENST00000471978 FAM86B1E9PN63 330 aa25.66■■□□□ 1.7
C9orf3-213ENST00000471978 DDX39AO00148 427 aaKnown RBP25.66■■□□□ 1.7
C9orf3-213ENST00000471978 ATG7O95352 703 aa25.66■■□□□ 1.7
C9orf3-213ENST00000471978 RPLP2P05387 115 aaKnown RBP25.66■■□□□ 1.7
C9orf3-213ENST00000471978 FAM86B2P0C5J1 330 aa25.66■■□□□ 1.7
C9orf3-213ENST00000471978 KCNQ1P51787 676 aa25.66■■□□□ 1.7
C9orf3-213ENST00000471978 MRPS6P82932 125 aaKnown RBP25.66■■□□□ 1.7
C9orf3-213ENST00000471978 AKAP17AQ02040 695 aaKnown RBP25.66■■□□□ 1.7
C9orf3-213ENST00000471978 FBXO47Q5MNV8 452 aa25.66■■□□□ 1.7
C9orf3-213ENST00000471978 PLA2G4DQ86XP0 818 aa25.66■■□□□ 1.7
C9orf3-213ENST00000471978 PHKBQ93100 1093 aa25.66■■□□□ 1.7
C9orf3-213ENST00000471978 AGXT2Q9BYV1 514 aa25.66■■□□□ 1.7
C9orf3-213ENST00000471978 NCOR1O75376 2440 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 ADAMTS3O15072 1205 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 CCNE2O96020 404 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 CYP3A4P08684 503 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 IER5Q5VY09 327 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 MCTP2Q6DN12 878 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 REXO1Q8N1G1 1221 aaKnown RBP25.65■■□□□ 1.7
C9orf3-213ENST00000471978 TRAPPC12Q8WVT3 735 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 CRYGNQ8WXF5 182 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 SAMD11Q96NU1 681 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 PCDHA2Q9Y5H9 948 aa25.65■■□□□ 1.7
C9orf3-213ENST00000471978 POTEB3A0JP26 581 aa25.64■■□□□ 1.7
C9orf3-213ENST00000471978 PPFIA3O75145 1194 aa25.64■■□□□ 1.7
C9orf3-213ENST00000471978 GNA11P29992 359 aa25.64■■□□□ 1.7
C9orf3-213ENST00000471978 SLC26A2P50443 739 aa25.64■■□□□ 1.7
C9orf3-213ENST00000471978 EPC2Q52LR7 807 aa25.64■■□□□ 1.7
C9orf3-213ENST00000471978 POTEBQ6S5H4 581 aa25.64■■□□□ 1.7
C9orf3-213ENST00000471978 TSHZ1Q6ZSZ6 1077 aa25.64■■□□□ 1.7
C9orf3-213ENST00000471978 IGLV3-22A0A075B6J6 115 aa25.63■■□□□ 1.69
C9orf3-213ENST00000471978 IGKV6D-21A0A0A0MT36 114 aa25.63■■□□□ 1.69
C9orf3-213ENST00000471978 IPO5O00410 1097 aaKnown RBP25.63■■□□□ 1.69
C9orf3-213ENST00000471978 BACH1O14867 736 aa25.63■■□□□ 1.69
C9orf3-213ENST00000471978 NTRK3Q16288 839 aa25.63■■□□□ 1.69
C9orf3-213ENST00000471978 FAM160B1Q5W0V3 765 aa25.63■■□□□ 1.69
C9orf3-213ENST00000471978 ABHD15Q6UXT9 468 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms