RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 CFAP43Q8NDM7 1665 aa9.27□□□□□ -0.92
CD47-204ENST00000471694 THPOP40225 353 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 CCDC15Q0P6D6 951 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 DPYDQ12882 1025 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 COG2Q14746 738 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 PTPROQ16827 1216 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 STYK1Q6J9G0 422 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 C8orf74Q6P047 294 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 NBPF15Q8N660 670 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 FAM81BQ96LP2 452 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 AFF4Q9UHB7 1163 aaKnown RBP9.27□□□□□ -0.93
CD47-204ENST00000471694 MINPP1Q9UNW1 487 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 PCDHB15Q9Y5E8 787 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 CYP2D7A0A087X1C5 515 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 BRD1O95696 1058 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 FGAP02671 866 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 RPS12P25398 132 aaKnown RBP9.27□□□□□ -0.93
CD47-204ENST00000471694 ZSCAN23Q3MJ62 389 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 MGAT5BQ3V5L5 792 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 MEI1Q5TIA1 1274 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 GLB1LQ6UWU2 654 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 ZNF148Q9UQR1 794 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 ROBO2Q9HCK4 1378 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 ADORA2BP29275 332 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 POLR2FP61218 127 aaKnown RBP9.27□□□□□ -0.93
CD47-204ENST00000471694 CYP4A22Q5TCH4 519 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 TTC19Q6DKK2 380 aaPredicted RBP9.27□□□□□ -0.93
CD47-204ENST00000471694 DARS2Q6PI48 645 aaKnown RBP9.27□□□□□ -0.93
CD47-204ENST00000471694 EFHBQ8N7U6 833 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 KIF12Q96FN5 646 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 PCDHB12Q9Y5F1 795 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 DRP2Q13474 957 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
CD47-204ENST00000471694 TMCO4Q5TGY1 634 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 CCDC84Q86UT8 332 aaPredicted RBP9.27□□□□□ -0.93
CD47-204ENST00000471694 PSMB7Q99436 277 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 SUCLA2Q9P2R7 463 aaPredicted RBP9.27□□□□□ -0.93
CD47-204ENST00000471694 MAP3K4Q9Y6R4 1608 aa9.27□□□□□ -0.93
CD47-204ENST00000471694 ITGA4P13612 1032 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 COG7P83436 770 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 MCM6Q14566 821 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 MFSD4BQ5TF39 518 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 CCDC62Q6P9F0 684 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 TBC1D19Q8N5T2 526 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 EXT2Q93063 718 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 DACT3Q96B18 629 aaPredicted RBP9.26□□□□□ -0.93
CD47-204ENST00000471694 TMEM169Q96HH4 297 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 ACAP3Q96P50 834 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 HAUS8Q9BT25 410 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 RNF208Q9H0X6 261 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 SCUBE2Q9NQ36 999 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 GABBR1Q9UBS5 961 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 CPA4Q9UI42 421 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 SRPRBQ9Y5M8 271 aaKnown RBP9.26□□□□□ -0.93
CD47-204ENST00000471694 DNAJC6O75061 913 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 SERPIND1P05546 499 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 FBXW10Q5XX13 1052 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 CCDC13Q8IYE1 715 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 NUDCD1Q96RS6 583 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 CALN1Q9BXU9 219 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 PARVGQ9HBI0 331 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 SARS2Q9NP81 518 aaKnown RBP9.26□□□□□ -0.93
CD47-204ENST00000471694 FIS1Q9Y3D6 152 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 KDM5AP29375 1690 aaKnown RBP9.26□□□□□ -0.93
CD47-204ENST00000471694 MCF2LO15068 1137 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 ZNF202O95125 648 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 HMBSP08397 361 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 FAM186BQ8IYM0 893 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 MLKLQ8NB16 471 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 TRIM11Q96F44 468 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 SFMBT1Q9UHJ3 866 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 PEG3Q9GZU2 1588 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 C17orf102A2RUQ5 167 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 ESPNB1AK53 854 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 YWHAGP61981 247 aaKnown RBP eCLIP9.26□□□□□ -0.93
CD47-204ENST00000471694 DGKDQ16760 1214 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 ZNF699Q32M78 642 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 RCSD1Q6JBY9 416 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 PPFIBP2Q8ND30 876 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 ZNF512Q96ME7 567 aaPredicted RBP9.26□□□□□ -0.93
CD47-204ENST00000471694 FSD1LQ9BXM9 530 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 MAN1C1Q9NR34 630 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 GCC2Q8IWJ2 1684 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 CPP00450 1065 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 KRT1P04264 644 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 NME3Q13232 169 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 EXOC3L4Q17RC7 722 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 DCUN1D1Q96GG9 259 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 PPP1R12CQ9BZL4 782 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.26□□□□□ -0.93
CD47-204ENST00000471694 MAPKBP1O60336 1514 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 MYOM2P54296 1465 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 TGFB2P61812 414 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 TMEM132BQ14DG7 1078 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 MMEL1Q495T6 779 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 NOSTRINQ8IVI9 506 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 LZICQ8WZA0 190 aa9.26□□□□□ -0.93
CD47-204ENST00000471694 LARP4BQ92615 738 aaKnown RBP9.26□□□□□ -0.93
CD47-204ENST00000471694 DEFB115Q30KQ5 88 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms