RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 KIF5AQ12840 1032 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 ADAM9Q13443 819 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 KNOP1Q1ED39 458 aaKnown RBP20.53■□□□□ 0.88
COL20A1-205ENST00000471582 CEP55Q53EZ4 464 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 TRAPPC11Q7Z392 1133 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 SFR1Q86XK3 245 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 BHMT2Q9H2M3 363 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 ZHX3Q9H4I2 956 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 OLFML3Q9NRN5 406 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 RBBP6Q7Z6E9 1792 aaKnown RBP20.53■□□□□ 0.88
COL20A1-205ENST00000471582 SBF1O95248 1867 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 SSU72P8A0A1W2PR75 194 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 PDXKO00764 312 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 ZSCAN20P17040 1043 aaPredicted RBP20.53■□□□□ 0.88
COL20A1-205ENST00000471582 GAP43P17677 238 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 CYP4A11Q02928 519 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 PAPD7Q5XG87 772 aaKnown RBP20.53■□□□□ 0.88
COL20A1-205ENST00000471582 RRAGAQ7L523 313 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 TBC1D5Q92609 795 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 WDR11Q9BZH6 1224 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 LACRTQ9GZZ8 138 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 FHOD1Q9Y613 1164 aa20.53■□□□□ 0.88
COL20A1-205ENST00000471582 CTAGE15A4D2H0 777 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 TBCAO75347 108 aaKnown RBP20.52■□□□□ 0.88
COL20A1-205ENST00000471582 CTAGE8P0CG41 777 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 CASP5P51878 434 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 KIF11P52732 1056 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 MAPK8IP2Q13387 824 aaPredicted RBP20.52■□□□□ 0.88
COL20A1-205ENST00000471582 CACNA2D4Q7Z3S7 1137 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 FRMD5Q7Z6J6 570 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 CTAGE6Q86UF2 777 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 LDHDQ86WU2 507 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 CTAGE4Q8IX94 777 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 UBE2Q2Q8WVN8 375 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 PARD6BQ9BYG5 372 aa20.52■□□□□ 0.88
COL20A1-205ENST00000471582 PUF60Q9UHX1 559 aaKnown RBP20.52■□□□□ 0.88
COL20A1-205ENST00000471582 RCCD1A6NED2 376 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 ZNF263O14978 683 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 CALUO43852 315 aaPredicted RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 USO1O60763 962 aaKnown RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 NR2F2P24468 414 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 TXLNBQ8N3L3 684 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 MSANTD4Q8NCY6 345 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 SMCR8Q8TEV9 937 aaPredicted RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 IFIH1Q9BYX4 1025 aaKnown RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 GINM1Q9NU53 330 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 CCDC151A5D8V7 595 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 EGFRP00533 1210 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 ICAM1P05362 532 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 PLEKP08567 350 aaPredicted RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 PNMA6AP0CW24 399 aaPredicted RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 EIF4A3P38919 411 aaKnown RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 HSD17B4P51659 736 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 BRD3Q15059 726 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 ZYXQ15942 572 aaKnown RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 SAMD7Q7Z3H4 446 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 GPC2Q8N158 579 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 RUSC1Q9BVN2 902 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 DEF6Q9H4E7 631 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 TYW1Q9NV66 732 aaKnown RBP20.51■□□□□ 0.87
COL20A1-205ENST00000471582 RGL1Q9NZL6 768 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 KCND2Q9NZV8 630 aa20.51■□□□□ 0.87
COL20A1-205ENST00000471582 GAS7O60861 476 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 NOL4O94818 638 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 SLITRK3O94933 977 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 TUBBP07437 444 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 CYP27A1Q02318 531 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 GHRHRQ02643 423 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 TBC1D10BQ4KMP7 808 aaPredicted RBP20.5■□□□□ 0.87
COL20A1-205ENST00000471582 RINT1Q6NUQ1 792 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 CC2D1AQ6P1N0 951 aaPredicted RBP20.5■□□□□ 0.87
COL20A1-205ENST00000471582 KRT26Q7Z3Y9 468 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 LPAR1Q92633 364 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 SECISBP2LQ93073 1101 aaKnown RBP20.5■□□□□ 0.87
COL20A1-205ENST00000471582 GLIS2Q9BZE0 524 aaPredicted RBP20.5■□□□□ 0.87
COL20A1-205ENST00000471582 EPC1Q9H2F5 836 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.5■□□□□ 0.87
COL20A1-205ENST00000471582 HACL1Q9UJ83 578 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 PCDHA13Q9Y5I0 950 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 SAR1BQ9Y6B6 198 aa20.5■□□□□ 0.87
COL20A1-205ENST00000471582 PHF20L1A8MW92 1017 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 EIF3DO15371 548 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL20A1-205ENST00000471582 SLC16A3O15427 465 aaKnown RBP20.49■□□□□ 0.87
COL20A1-205ENST00000471582 AKR1B10O60218 316 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 HOXD13P35453 343 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 ASTE1Q2TB18 679 aaPredicted RBP20.49■□□□□ 0.87
COL20A1-205ENST00000471582 CCDC155Q8N6L0 562 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 TEPSINQ96N21 525 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 ZSWIM4Q9H7M6 989 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 FBXO28Q9NVF7 368 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 RAB21Q9UL25 225 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 TFR2Q9UP52 801 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
COL20A1-205ENST00000471582 ERCC3P19447 782 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 RPL13P26373 211 aaKnown RBP20.49■□□□□ 0.87
COL20A1-205ENST00000471582 B3GNT9Q6UX72 402 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 TRIM58Q8NG06 486 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 RPGRIP1Q96KN7 1286 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 ZNF577Q9BSK1 485 aa20.49■□□□□ 0.87
COL20A1-205ENST00000471582 LSM14BQ9BX40 385 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms