RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 PDIA5Q14554 519 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 MFSD10Q14728 455 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 UGCGQ16739 394 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 PLPPR4Q7Z2D5 763 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 PPP1R13LQ8WUF5 828 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 GLG1Q92896 1179 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 GLT1D1Q96MS3 346 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 HSD17B14Q9BPX1 270 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 SENP6Q9GZR1 1112 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-206ENST00000470241 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 TUT1Q9H6E5 874 aaKnown RBP11.87□□□□□ -0.51
SMC1A-206ENST00000470241 C11orf49Q9H6J7 331 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 AZI2Q9H6S1 392 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 STARD7Q9NQZ5 370 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 RGL1Q9NZL6 768 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 LRWD1Q9UFC0 647 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
SMC1A-206ENST00000470241 SRPRBQ9Y5M8 271 aaKnown RBP11.87□□□□□ -0.51
SMC1A-206ENST00000470241 MAFBQ9Y5Q3 323 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-206ENST00000470241 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 SPTLC2O15270 562 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 ZNF862O60290 1169 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 SLITRK3O94933 977 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 STBD1O95210 358 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 P4HBP07237 508 aaKnown RBP11.86□□□□□ -0.51
SMC1A-206ENST00000470241 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 MARK3P27448 753 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 PLCB4Q15147 1175 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 KIAA0753Q2KHM9 967 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 NBPF20Q3BBV1 942 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 NECAB2Q7Z6G3 386 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 SLC43A3Q8NBI5 491 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
SMC1A-206ENST00000470241 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
SMC1A-206ENST00000470241 DYDC2Q96IM9 177 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 CLIC6Q96NY7 704 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 EIF2AK1Q9BQI3 630 aaKnown RBP11.86□□□□□ -0.51
SMC1A-206ENST00000470241 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 RNPEPQ9H4A4 650 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 ERAP1Q9NZ08 941 aa11.86□□□□□ -0.51
SMC1A-206ENST00000470241 WRAP73Q9P2S5 460 aaPredicted RBP11.86□□□□□ -0.51
SMC1A-206ENST00000470241 ZNF215Q9UL58 517 aaPredicted RBP11.86□□□□□ -0.51
SMC1A-206ENST00000470241 DOCK5Q9H7D0 1870 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 MED24O75448 989 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
SMC1A-206ENST00000470241 CDC25AP30304 524 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 LONP1P36776 959 aaKnown RBP11.85□□□□□ -0.51
SMC1A-206ENST00000470241 QARSP47897 775 aaKnown RBP11.85□□□□□ -0.51
SMC1A-206ENST00000470241 SLC26A2P50443 739 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 CHMP4BP1P59074 171 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 PSMC5P62195 406 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 CYP4A11Q02928 519 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 ITGA7Q13683 1181 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 CTTNQ14247 550 aaKnown RBP11.85□□□□□ -0.51
SMC1A-206ENST00000470241 SNX17Q15036 470 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 SLC39A5Q6ZMH5 540 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 CATSPER3Q86XQ3 398 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
SMC1A-206ENST00000470241 NEK9Q8TD19 979 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 KCNG4Q8TDN1 519 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 ATP6V0A1Q93050 837 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 VTI1AQ96AJ9 217 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 AK8Q96MA6 479 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 LXNQ9BS40 222 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 MMTAG2Q9BU76 263 aaKnown RBP11.85□□□□□ -0.51
SMC1A-206ENST00000470241 POLR3CQ9BUI4 534 aaPredicted RBP11.85□□□□□ -0.51
SMC1A-206ENST00000470241 RAB34Q9BZG1 259 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 CSRNP2Q9H175 543 aa11.85□□□□□ -0.51
SMC1A-206ENST00000470241 KIAA0100Q14667 2235 aaKnown RBP11.84□□□□□ -0.51
SMC1A-206ENST00000470241 A0A0U1RQG5 324 aaPredicted RBP11.84□□□□□ -0.51
SMC1A-206ENST00000470241 ARVCFO00192 962 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 LYPLA2O95372 231 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 OATP04181 439 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 RPA1P27694 616 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 CDK7P50613 346 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
SMC1A-206ENST00000470241 PRKCEQ02156 737 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 HIC1Q14526 733 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 ECM1Q16610 540 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 SPECC1Q5M775 1068 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 AXDND1Q5T1B0 1012 aaPredicted RBP11.84□□□□□ -0.51
SMC1A-206ENST00000470241 KRT79Q5XKE5 535 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 NFRKBQ6P4R8 1299 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 USP49Q70CQ1 688 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 TPH2Q8IWU9 490 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 C4orf19Q8IY42 314 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 SNX29Q8TEQ0 813 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 SPATA32Q96LK8 384 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 ZSWIM4Q9H7M6 989 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 GDPD2Q9HCC8 539 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 TUFT1Q9NNX1 390 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 HDAC6Q9UBN7 1215 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms