RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 SEC63Q9UGP8 760 aaKnown RBP11.28□□□□□ -0.6
SMC4-210ENST00000469762 GGA2Q9UJY4 613 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 NAGPAQ9UK23 515 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.61e-8■■■■■ 54.3
SMC4-210ENST00000469762 SRRM3A6NNA2 597 aaPredicted RBP11.28□□□□□ -0.6
SMC4-210ENST00000469762 BACH1O14867 736 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 TRAPPC3O43617 180 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 CYP11B2P19099 503 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 HPDP32754 393 aaPredicted RBP11.28□□□□□ -0.6
SMC4-210ENST00000469762 LRIG3Q6UXM1 1119 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 FAM228AQ86W67 206 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 WDR66Q8TBY9 1149 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 CDK5RAP3Q96JB5 506 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 TSG101Q99816 390 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 DDX47Q9H0S4 455 aaKnown RBP11.28□□□□□ -0.6
SMC4-210ENST00000469762 CD248Q9HCU0 757 aa11.28□□□□□ -0.6
SMC4-210ENST00000469762 GPR75-ASB3A0A0A6YYF3 556 aa11.27□□□□□ -0.6
SMC4-210ENST00000469762 ADCY7P51828 1080 aa11.27□□□□□ -0.6
SMC4-210ENST00000469762 IFT88Q13099 833 aa11.27□□□□□ -0.6
SMC4-210ENST00000469762 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.6
SMC4-210ENST00000469762 PPANQ9NQ55 473 aaKnown RBP11.27□□□□□ -0.6
SMC4-210ENST00000469762 KDM4FA0A1W2PPD8 638 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 E7EVH7 732 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 TPCN2Q8NHX9 752 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 CABS1Q96KC9 395 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 P2RX7Q99572 595 aaKnown RBP11.27□□□□□ -0.61
SMC4-210ENST00000469762 TXLNGYQ9BZA5 131 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 EPB41L4BQ9H329 900 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 POTECB2RU33 542 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 UCHL3P15374 230 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 TMEM266Q2M3C6 531 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 TTBK2Q6IQ55 1244 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 MAATS1Q7Z4T9 603 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 SPATS2Q86XZ4 545 aaKnown RBP11.27□□□□□ -0.61
SMC4-210ENST00000469762 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.61
SMC4-210ENST00000469762 RASGEF1CQ8N431 466 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 FBXL5Q9UKA1 691 aa11.27□□□□□ -0.61
SMC4-210ENST00000469762 NOC2LQ9Y3T9 749 aaKnown RBP11.27□□□□□ -0.61
SMC4-210ENST00000469762 PON1P27169 355 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 POLD1P28340 1107 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 TNNI2P48788 182 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 MNAT1P51948 309 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 SLC12A3P55017 1021 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 RPS6KA1Q15418 735 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 ASIC2Q16515 512 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 ATP8B4Q8TF62 1192 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 EMILIN3Q9NT22 766 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 MTMR4Q9NYA4 1195 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 AMACRQ9UHK6 382 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 DDX25Q9UHL0 483 aaKnown RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 KIAA1024Q9UPX6 916 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 DAPK3O43293 454 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 MED24O75448 989 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 BAG3O95817 575 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 ADAM9Q13443 819 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 DCAF12L1Q5VU92 463 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 ZKSCAN4Q969J2 545 aaPredicted RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 ATF5Q9Y2D1 282 aaPredicted RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 PLIN4Q96Q06 1357 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 C5orf60A6NFR6 353 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 PLA2G4BP0C869 781 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 JAM2P57087 298 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 PSMC6P62333 389 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 TNNC1P63316 161 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 SEPT2Q15019 361 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 UBAP2Q5T6F2 1119 aaKnown RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 GJB7Q6PEY0 223 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 TMC3Q7Z5M5 1100 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 ADGRF4Q8IZF3 695 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.26□□□□□ -0.611e-8■■■■■ 268.2
SMC4-210ENST00000469762 A1CFQ9NQ94 594 aaKnown RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 GREB1LQ9C091 1923 aaPredicted RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 F8W031 263 aaPredicted RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 DDX3XO00571 662 aaKnown RBP eCLIP11.26□□□□□ -0.614e-78■■■■■ 527.9
SMC4-210ENST00000469762 CEP104O60308 925 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 PAEPP09466 180 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 RFC4P35249 363 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 STAT3P40763 770 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 SMTNP53814 917 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 GABPAQ06546 454 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 SPIRE1Q08AE8 756 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 EPM2AIP1Q7L775 607 aaPredicted RBP11.26□□□□□ -0.61
SMC4-210ENST00000469762 NT5DC3Q86UY8 548 aa11.26□□□□□ -0.61
SMC4-210ENST00000469762 GMNCA6NCL1 334 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 TTI1O43156 1089 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 SLURP2P0DP57 97 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 PRKCIP41743 596 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 EIF6P56537 245 aaKnown RBP11.25□□□□□ -0.61
SMC4-210ENST00000469762 CUL1Q13616 776 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 EPHA7Q15375 998 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 NBPF5PQ86XG9 351 aaPredicted RBP11.25□□□□□ -0.61
SMC4-210ENST00000469762 RAPGEF5Q92565 580 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 CALR3Q96L12 384 aaKnown RBP11.25□□□□□ -0.61
SMC4-210ENST00000469762 IKZF4Q9H2S9 585 aa11.25□□□□□ -0.61
SMC4-210ENST00000469762 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms