RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 DCAF8L1A6NGE4 600 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L15C9J2P7 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L10C9JJH3 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L13C9JLJ4 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L11C9JVI0 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L18D6R9N7 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L22D6RA61 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L17D6RBQ6 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L19D6RCP7 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L20D6RJB6 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 TFRCP02786 760 aaKnown RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 PDHA1P08559 390 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 SMARCA1P28370 1054 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 TRPC1P48995 793 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 GNAQP50148 359 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L24Q0WX57 530 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 NBPF12Q5TAG4 269 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 SLFN13Q68D06 897 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 RSBN1LQ6PCB5 846 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 USP17L6PQ6QN14 398 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 SRBD1Q8N5C6 995 aaKnown RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 MSANTD4Q8NCY6 345 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 SLC35B4Q969S0 331 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 NR1H4Q96RI1 486 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 EBF2Q9HAK2 575 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 ARHGEF10LQ9HCE6 1279 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 TMEM260Q9NX78 707 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 BARX2Q9UMQ3 279 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 COL1A1P02452 1464 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 BTAF1O14981 1849 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 PDE4DIPQ5VU43 2346 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 STXBP3O00186 592 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 FDPSP14324 419 aaKnown RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 RASA1P20936 1047 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 TXKP42681 527 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 DACT2Q5SW24 774 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 YTHDF3Q7Z739 585 aaKnown RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 KCTD17Q8N5Z5 321 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 GBP7Q8N8V2 638 aaPredicted RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 POLR3CQ9BUI4 534 aaPredicted RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 LZTFL1Q9NQ48 299 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 WDR35Q9P2L0 1181 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 PHF24Q9UPV7 400 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 SYNRGQ9UMZ2 1314 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 CCNT1O60563 726 aaKnown RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 HMGB2P26583 209 aaKnown RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 AARSP49588 968 aaKnown RBP eCLIP10.84□□□□□ -0.67
NUP50-214ENST00000469163 BPIFB4P59827 614 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 MAP1SQ66K74 1059 aaPredicted RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 DPY19L2Q6NUT2 758 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 SULF1Q8IWU6 871 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 ARHGAP18Q8N392 663 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 SMYD1Q8NB12 490 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 ZNF473Q8WTR7 871 aaKnown RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 SNRNP27Q8WVK2 155 aaKnown RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 RRP36Q96EU6 259 aaKnown RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 SH2D3AQ9BRG2 576 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 OSBPL10Q9BXB5 764 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 MYOZ2Q9NPC6 264 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 SMCO2A6NFE2 343 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 SPTLC2O15270 562 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 EVI5O60447 810 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 PABPC4Q13310 644 aaKnown RBP eCLIP10.84□□□□□ -0.67
NUP50-214ENST00000469163 TAF11Q15544 211 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 STYK1Q6J9G0 422 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 NCCRP1Q6ZVX7 275 aaPredicted RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 LEO1Q8WVC0 666 aaPredicted RBP10.84□□□□□ -0.67
NUP50-214ENST00000469163 NDNQ99608 321 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 PI4KBQ9UBF8 816 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 ZHX2Q9Y6X8 837 aa10.84□□□□□ -0.67
NUP50-214ENST00000469163 WNT10BO00744 389 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 ZMYND10O75800 440 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 FLOT1O75955 427 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 ALAS1P13196 640 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 IDEP14735 1019 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 KCNJ6P48051 423 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 SEC24CP53992 1094 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 STX17P56962 302 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 HDLBPQ00341 1268 aaKnown RBP10.83□□□□□ -0.68
NUP50-214ENST00000469163 CCDC38Q502W7 563 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 DDX12PQ92771 950 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 SPATA17Q96L03 361 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 ZMAT2Q96NC0 199 aaKnown RBP10.83□□□□□ -0.68
NUP50-214ENST00000469163 DEFB129Q9H1M3 183 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 IL17RBQ9NRM6 502 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 ZNF70Q9UC06 446 aaPredicted RBP10.83□□□□□ -0.68
NUP50-214ENST00000469163 HACL1Q9UJ83 578 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 PCDHB6Q9Y5E3 794 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.83□□□□□ -0.68
NUP50-214ENST00000469163 E7EVH7 732 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 P4HA2O15460 535 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 TMCC1O94876 653 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 IGBP1P78318 339 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 POSTNQ15063 836 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 P3H1Q32P28 736 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 KCTD16Q68DU8 428 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 KANK3Q6NY19 840 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms