RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PMLP29590 882 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 IL9RQ01113 521 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 MECOMQ03112 1051 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 EEPD1Q7L9B9 569 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 KSR1Q8IVT5 923 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 LINC00116Q8NCU8 138 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 FBXL13Q8NEE6 735 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 CFAP36Q96G28 342 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 HEXIM2Q96MH2 286 aaKnown RBP9.41□□□□□ -0.9
HPS4-209ENST00000466781 MTRQ99707 1265 aa9.41□□□□□ -0.9
HPS4-209ENST00000466781 PRPSAP2O60256 369 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 RECQLP46063 649 aaPredicted RBP9.4□□□□□ -0.9
HPS4-209ENST00000466781 URGCPQ8TCY9 931 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 LARP4BQ92615 738 aaKnown RBP9.4□□□□□ -0.9
HPS4-209ENST00000466781 BRIP1Q9BX63 1249 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 HACD3Q9P035 362 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 NXF1Q9UBU9 619 aaKnown RBP9.4□□□□□ -0.9
HPS4-209ENST00000466781 MYO3AQ8NEV4 1616 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 hCG_1984214I3L0E3 225 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 SESN3P58005 492 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 OSTNP61366 133 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 DYNLT1P63172 113 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 TRIM68Q6AZZ1 485 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 FAM186BQ8IYM0 893 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 ZNF713Q8N859 430 aaPredicted RBP9.4□□□□□ -0.9
HPS4-209ENST00000466781 GDAP1L1Q96MZ0 367 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 PCIF1Q9H4Z3 704 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 HACL1Q9UJ83 578 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 DCCP43146 1447 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 KCNA4P22459 653 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 HOXD10P28358 340 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 SLC16A2P36021 539 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 YWHAHQ04917 246 aaPredicted RBP9.4□□□□□ -0.9
HPS4-209ENST00000466781 NFIXQ14938 502 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 TBCCQ15814 346 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 TTLL11Q8NHH1 800 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 DHX38Q92620 1227 aaKnown RBP9.4□□□□□ -0.9
HPS4-209ENST00000466781 PFKFB2O60825 505 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 CHEK2O96017 543 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 MARK3P27448 753 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 MSH2P43246 934 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 SH3BGRP55822 239 aaPredicted RBP9.4□□□□□ -0.9
HPS4-209ENST00000466781 RCN2Q14257 317 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 NAA35Q5VZE5 725 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 SPOPLQ6IQ16 392 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 KLC3Q6P597 504 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 FRA10AC1Q70Z53 315 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 MRPL47Q9HD33 250 aaKnown RBP9.4□□□□□ -0.9
HPS4-209ENST00000466781 TECPR2O15040 1411 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 ADAMTS13Q76LX8 1427 aa9.4□□□□□ -0.9
HPS4-209ENST00000466781 ESRRBO95718 433 aa9.4□□□□□ -0.91
HPS4-209ENST00000466781 FGAP02671 866 aa9.4□□□□□ -0.91
HPS4-209ENST00000466781 NR2F2P24468 414 aa9.4□□□□□ -0.91
HPS4-209ENST00000466781 PTGDRQ13258 359 aa9.4□□□□□ -0.91
HPS4-209ENST00000466781 BRD3Q15059 726 aa9.4□□□□□ -0.91
HPS4-209ENST00000466781 PDCD7Q8N8D1 485 aaKnown RBP9.4□□□□□ -0.91
HPS4-209ENST00000466781 SLC7A5P2Q9GIP4 190 aa9.4□□□□□ -0.91
HPS4-209ENST00000466781 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.91
HPS4-209ENST00000466781 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.91
HPS4-209ENST00000466781 CDHR2Q9BYE9 1310 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 PYGLP06737 847 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 ANGPTL8Q6UXH0 198 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 FAM160B2Q86V87 743 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 SPATA17Q96L03 361 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 TEKT2Q9UIF3 430 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 DBNLQ9UJU6 430 aaKnown RBP9.39□□□□□ -0.91
HPS4-209ENST00000466781 H7C1W4 665 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 HIP1RO75146 1068 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 PAMP19021 973 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 RASSF7Q02833 373 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 SNX1Q13596 522 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 SKIV2LQ15477 1246 aaKnown RBP9.39□□□□□ -0.91
HPS4-209ENST00000466781 SGO2Q562F6 1265 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 RWDD4Q6NW29 188 aaKnown RBP9.39□□□□□ -0.91
HPS4-209ENST00000466781 SCARA5Q6ZMJ2 495 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 LCORLQ8N3X6 602 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 TCP11Q8WWU5 503 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 DYNLL2Q96FJ2 89 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 TM6SF1Q9BZW5 370 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 XAB2Q9HCS7 855 aaKnown RBP9.39□□□□□ -0.91
HPS4-209ENST00000466781 KRT82Q9NSB4 513 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 ABCC12Q96J65 1359 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
HPS4-209ENST00000466781 CCHCR1Q8TD31 782 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 DRC3Q9H069 523 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 UBN2Q6ZU65 1347 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 CYP2D7A0A087X1C5 515 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 APOEP02649 317 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 IFNA8P32881 189 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 ADD2P35612 726 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 BASP1P80723 227 aaKnown RBP9.39□□□□□ -0.91
HPS4-209ENST00000466781 ACBD5Q5T8D3 534 aaPredicted RBP9.39□□□□□ -0.91
HPS4-209ENST00000466781 SPATA1Q5VX52 437 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 TRIM67Q6ZTA4 783 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 AK8Q96MA6 479 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 IQGAP1P46940 1657 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 SASH1O94885 1247 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 PODNQ7Z5L7 613 aa9.39□□□□□ -0.91
HPS4-209ENST00000466781 SNX19Q92543 992 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms