RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 HEATR3Q7Z4Q2 680 aa15.48■□□□□ 0.07
CHD3-207ENST00000466233 MICU3Q86XE3 530 aa15.48■□□□□ 0.07
CHD3-207ENST00000466233 CMTR1Q8N1G2 835 aaKnown RBP15.48■□□□□ 0.07
CHD3-207ENST00000466233 CLP1Q92989 425 aaKnown RBP15.48■□□□□ 0.07
CHD3-207ENST00000466233 SDF4Q9BRK5 362 aa15.48■□□□□ 0.07
CHD3-207ENST00000466233 PLVAPQ9BX97 442 aa15.48■□□□□ 0.07
CHD3-207ENST00000466233 UBE2ZQ9H832 354 aaPredicted RBP15.48■□□□□ 0.07
CHD3-207ENST00000466233 RC3H2Q9HBD1 1191 aaKnown RBP15.48■□□□□ 0.07
CHD3-207ENST00000466233 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
CHD3-207ENST00000466233 CNTNAP5Q8WYK1 1306 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 KDM3AQ9Y4C1 1321 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 IGKV6D-21A0A0A0MT36 114 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 ENPP3O14638 875 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 RXRAP19793 462 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 SREBF1P36956 1147 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 CLK2P49760 499 aaKnown RBP15.47■□□□□ 0.07
CHD3-207ENST00000466233 NAPAP54920 295 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 LPIN1Q14693 890 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 RTN1Q16799 776 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 NAALADL2Q58DX5 795 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 FBXO47Q5MNV8 452 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 WWC2Q6AWC2 1192 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 FAM117BQ6P1L5 589 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 FIBCD1Q8N539 461 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
CHD3-207ENST00000466233 MTUS1Q9ULD2 1270 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 TELO2Q9Y4R8 837 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 PCDHA2Q9Y5H9 948 aa15.47■□□□□ 0.07
CHD3-207ENST00000466233 ESYT2A0FGR8 921 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 INSRRP14616 1297 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 BMPR1AP36894 532 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 ADCY7P51828 1080 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 MRPS6P82932 125 aaKnown RBP15.46■□□□□ 0.07
CHD3-207ENST00000466233 SP4Q02446 784 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 GPM6BQ13491 265 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 UBE2SQ16763 222 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 RUFY4Q6ZNE9 571 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 CRIPAKQ8N1N5 446 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 CCDC82Q8N4S0 544 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 BANK1Q8NDB2 785 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 KCNB2Q92953 911 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 ZNF689Q96CS4 500 aaPredicted RBP15.46■□□□□ 0.07
CHD3-207ENST00000466233 PCYT2Q99447 389 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 C11orf84Q9BUA3 381 aaPredicted RBP15.46■□□□□ 0.07
CHD3-207ENST00000466233 FAM50BQ9Y247 325 aa15.46■□□□□ 0.07
CHD3-207ENST00000466233 COL4A4P53420 1690 aaPredicted RBP15.45■□□□□ 0.06
CHD3-207ENST00000466233 SMIM35A0A1B0GVV1 85 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 SMCO2A6NFE2 343 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 M0QZ92 97 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 STXBP3O00186 592 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 CYP3A4P08684 503 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 LINC00271P0C7V0 271 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 GHRP10912 638 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 STAT5BP51692 787 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 ACTR2P61160 394 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 IRX6P78412 446 aaPredicted RBP15.45■□□□□ 0.06
CHD3-207ENST00000466233 COL9A3Q14050 684 aaPredicted RBP15.45■□□□□ 0.06
CHD3-207ENST00000466233 ZNF710Q8N1W2 664 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 DNAJB3Q8WWF6 145 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 CRYGNQ8WXF5 182 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 P2RX5Q93086 422 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 PABPC5Q96DU9 382 aaKnown RBP15.45■□□□□ 0.06
CHD3-207ENST00000466233 NECAB3Q96P71 396 aaPredicted RBP15.45■□□□□ 0.06
CHD3-207ENST00000466233 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 OSBPL7Q9BZF2 842 aa15.45■□□□□ 0.06
CHD3-207ENST00000466233 NSUN3Q9H649 340 aaKnown RBP15.45■□□□□ 0.06
CHD3-207ENST00000466233 AGO4Q9HCK5 861 aaKnown RBP15.45■□□□□ 0.06
CHD3-207ENST00000466233 V9GY48 417 aaPredicted RBP15.45■□□□□ 0.06
CHD3-207ENST00000466233 ADGRA3Q8IWK6 1321 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 IGSF9BQ9UPX0 1349 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 PI4K2BG5E9Z4 385 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 GPR37L1O60883 481 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 CDC45O75419 566 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 DGKIO75912 1065 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 UPP2O95045 317 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 ODR4Q5SWX8 454 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 TYW1BQ6NUM6 668 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 FAM178BQ8IXR5 827 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 CMTR2Q8IYT2 770 aaKnown RBP15.44■□□□□ 0.06
CHD3-207ENST00000466233 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.44■□□□□ 0.06
CHD3-207ENST00000466233 CCDC12Q8WUD4 166 aaPredicted RBP15.44■□□□□ 0.06
CHD3-207ENST00000466233 ANO3Q9BYT9 981 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 ZMYND12Q9H0C1 365 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 FAM217BQ9NTX9 383 aaPredicted RBP15.44■□□□□ 0.06
CHD3-207ENST00000466233 PRKAG3Q9UGI9 489 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 BRPF3Q9ULD4 1205 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 CDY2AQ9Y6F7 541 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 COL1A2P08123 1366 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 NID2Q14112 1375 aa15.44■□□□□ 0.06
CHD3-207ENST00000466233 KAT6AQ92794 2004 aa15.43■□□□□ 0.06
CHD3-207ENST00000466233 hCG_1642624A0A1W2PR95 340 aa15.43■□□□□ 0.06
CHD3-207ENST00000466233 POTEB3A0JP26 581 aa15.43■□□□□ 0.06
CHD3-207ENST00000466233 GRXCR2A6NFK2 248 aa15.43■□□□□ 0.06
CHD3-207ENST00000466233 EPB41L2O43491 1005 aaKnown RBP15.43■□□□□ 0.06
CHD3-207ENST00000466233 HBP1O60381 514 aa15.43■□□□□ 0.06
CHD3-207ENST00000466233 STAG3L1P0CL83 205 aa15.43■□□□□ 0.06
CHD3-207ENST00000466233 MARK3P27448 753 aa15.43■□□□□ 0.06
CHD3-207ENST00000466233 PLCB4Q15147 1175 aa15.43■□□□□ 0.06
CHD3-207ENST00000466233 PFKFB3Q16875 520 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms