RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 SSBP05455 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
UBE4B-205ENST00000465408 MYL1P05976 194 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 FAM86B2P0C5J1 330 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 POLR2MP0CAP2 368 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 BCRP11274 1271 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 SKILP12757 684 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 ZNF76P36508 570 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 DNTTIP2Q5QJE6 756 aaKnown RBP9.26□□□□□ -0.93
UBE4B-205ENST00000465408 NCAPH2Q6IBW4 605 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 MOXD1Q6UVY6 613 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 DYMQ7RTS9 669 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 APTXQ7Z2E3 356 aaKnown RBP9.26□□□□□ -0.93
UBE4B-205ENST00000465408 ERMP1Q7Z2K6 904 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 LARP4BQ92615 738 aaKnown RBP9.26□□□□□ -0.93
UBE4B-205ENST00000465408 CCDC47Q96A33 483 aaKnown RBP9.26□□□□□ -0.93
UBE4B-205ENST00000465408 ZFP91Q96JP5 570 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-205ENST00000465408 CD320Q9NPF0 282 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 STK17AQ9UEE5 414 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 PCDHA12Q9UN75 941 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 MRPL11Q9Y3B7 192 aaKnown RBP9.26□□□□□ -0.93
UBE4B-205ENST00000465408 ABCB11O95342 1321 aa9.26□□□□□ -0.93
UBE4B-205ENST00000465408 ZNF318Q5VUA4 2279 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 A0A1B0GTH6 734 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 POTEB3A0JP26 581 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 E9PMD0 336 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 PIK3CDO00329 1044 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 IRF6O14896 467 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 WDR46O15213 610 aaKnown RBP9.25□□□□□ -0.93
UBE4B-205ENST00000465408 TEX33O43247 280 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 CTNND1O60716 968 aaKnown RBP9.25□□□□□ -0.93
UBE4B-205ENST00000465408 PLA2G6O60733 806 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 FCER1AP12319 257 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 IGFBP4P22692 258 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 SFPQP23246 707 aaKnown RBP eCLIP9.25□□□□□ -0.93
UBE4B-205ENST00000465408 PMS1P54277 932 aaKnown RBP9.25□□□□□ -0.93
UBE4B-205ENST00000465408 AMPD3Q01432 767 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 TRAF1Q13077 416 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 SNAPC2Q13487 334 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 STIM1Q13586 685 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 MTMR2Q13614 643 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 COL9A2Q14055 689 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-205ENST00000465408 NR1I3Q14994 352 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 KRT31Q15323 416 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 Q4G0T1 1027 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 DCAF15Q66K64 600 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 POTEBQ6S5H4 581 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 SLC30A10Q6XR72 485 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 SLFN12Q8IYM2 578 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 GIMAP8Q8ND71 665 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-205ENST00000465408 CYP2W1Q8TAV3 490 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 ETNPPLQ8TBG4 499 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 LENG9Q96B70 501 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 HOOK2Q96ED9 719 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 SLF1Q9BQI6 1058 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 TANGO6Q9C0B7 1094 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 KIAA1683Q9H0B3 1180 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 TAB2Q9NYJ8 693 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 CCPG1Q9ULG6 757 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 KIAA1024Q9UPX6 916 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 LRRC37A2A6NM11 1700 aa9.25□□□□□ -0.93
UBE4B-205ENST00000465408 MYO9BQ13459 2157 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 USP27XA6NNY8 438 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 KCNJ18B7U540 433 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 PSMA7O14818 248 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 MSH4O15457 936 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 TLL1O43897 1013 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 MED24O75448 989 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 CYP3A4P08684 503 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 IDEP14735 1019 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 CIITAP33076 1130 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 COPB1P53618 953 aaKnown RBP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 STK4Q13043 487 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 TBX2Q13207 712 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 KCNJ12Q14500 433 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 AAK1Q2M2I8 961 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 HYIQ5T013 277 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 POTEGQ6S5H5 508 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 UNC13DQ70J99 1090 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 ANKRD23Q86SG2 305 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 CREBRFQ8IUR6 639 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 CPXCR1Q8N123 301 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 BADQ92934 168 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 ZKSCAN4Q969J2 545 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 TIFAQ96CG3 184 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 RNPC3Q96LT9 517 aaKnown RBP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 WRNIP1Q96S55 665 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 WDR18Q9BV38 432 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 RPAP3Q9H6T3 665 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 RAVER2Q9HCJ3 691 aaKnown RBP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 HMX1Q9NP08 348 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 SLC39A2Q9NP94 309 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 EMILIN3Q9NT22 766 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 LIMA1Q9UHB6 759 aaKnown RBP9.24□□□□□ -0.93
UBE4B-205ENST00000465408 SNCAIPQ9Y6H5 919 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 UNC79Q9P2D8 2635 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 ZNF536O15090 1300 aa9.24□□□□□ -0.93
UBE4B-205ENST00000465408 KDM3AQ9Y4C1 1321 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms