RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 GDF6Q6KF10 455 aaPredicted RBP13.39□□□□□ -0.27
APTX-213ENST00000465003 C4orf32Q8N8J7 132 aa13.39□□□□□ -0.27
APTX-213ENST00000465003 RGL1Q9NZL6 768 aa13.39□□□□□ -0.27
APTX-213ENST00000465003 WRAP73Q9P2S5 460 aaPredicted RBP13.39□□□□□ -0.27
APTX-213ENST00000465003 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 EVI5O60447 810 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 F13A1P00488 732 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 CYP2C9P11712 490 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 ATP4AP20648 1035 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 STAT5BP51692 787 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 GRIN1Q05586 938 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 SF3A1Q15459 793 aaKnown RBP13.38□□□□□ -0.27
APTX-213ENST00000465003 ZNF746Q6NUN9 644 aaPredicted RBP13.38□□□□□ -0.27
APTX-213ENST00000465003 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 BRAPQ7Z569 592 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 NAP1L4Q99733 375 aaKnown RBP13.38□□□□□ -0.27
APTX-213ENST00000465003 AZI2Q9H6S1 392 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 ZNF302Q9NR11 478 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 SETD4Q9NVD3 440 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
APTX-213ENST00000465003 PCDHA12Q9UN75 941 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
APTX-213ENST00000465003 HAS3O00219 553 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 ZNF862O60290 1169 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 ATG7O95352 703 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 SMIM10L2BP0DMW5 78 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
APTX-213ENST00000465003 RGS19P49795 217 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 MLLT1Q03111 559 aaPredicted RBP13.38□□□□□ -0.27
APTX-213ENST00000465003 CTTNQ14247 550 aaKnown RBP13.38□□□□□ -0.27
APTX-213ENST00000465003 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 C7orf31Q8N865 590 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 TRPC6Q9Y210 931 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
APTX-213ENST00000465003 EMSYQ7Z589 1322 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 ZBTB39O15060 712 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 CABYRO75952 493 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 BAG4O95429 457 aaKnown RBP13.37□□□□□ -0.27
APTX-213ENST00000465003 PSAPP07602 524 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 ITGB8P26012 769 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 FAAP100Q0VG06 881 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 PPP2R5CQ13362 524 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 SNX17Q15036 470 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
APTX-213ENST00000465003 SLFN12Q8IYM2 578 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 WNT8BQ93098 351 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 PPP1R12CQ9BZL4 782 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
APTX-213ENST00000465003 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
APTX-213ENST00000465003 UMODL1Q5DID0 1318 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 CEP290O15078 2479 aa13.37□□□□□ -0.27
APTX-213ENST00000465003 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 VWA3AA6NCI4 1184 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 TBX3O15119 743 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 LGR5O75473 907 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 CDK7P50613 346 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 LMBR1Q8WVP7 490 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 DYDC2Q96IM9 177 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 KATNAL1Q9BW62 490 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 SMARCAD1Q9H4L7 1026 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 ERAP1Q9NZ08 941 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 TRIM43BA6NCK2 446 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 TREHO43280 583 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 KPNA6O60684 536 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 BRD1O95696 1058 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
APTX-213ENST00000465003 PRKCEQ02156 737 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 PTGISQ16647 500 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 PLA2G4FQ68DD2 849 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 SLC43A3Q8NBI5 491 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 TRIM43Q96BQ3 446 aaPredicted RBP13.36□□□□□ -0.27
APTX-213ENST00000465003 LXNQ9BS40 222 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 PDLIM7Q9NR12 457 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 GTF2IRD1Q9UHL9 959 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 IGSF9BQ9UPX0 1349 aa13.36□□□□□ -0.27
APTX-213ENST00000465003 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
APTX-213ENST00000465003 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
APTX-213ENST00000465003 INSRRP14616 1297 aa13.35□□□□□ -0.27
APTX-213ENST00000465003 JAK3P52333 1124 aa13.35□□□□□ -0.27
APTX-213ENST00000465003 DNM1Q05193 864 aaKnown RBP13.35□□□□□ -0.27
APTX-213ENST00000465003 PPFIA1Q13136 1202 aa13.35□□□□□ -0.27
APTX-213ENST00000465003 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
APTX-213ENST00000465003 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
APTX-213ENST00000465003 TPH2Q8IWU9 490 aa13.35□□□□□ -0.27
APTX-213ENST00000465003 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
APTX-213ENST00000465003 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
APTX-213ENST00000465003 NOD1Q9Y239 953 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms