RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 RAD54LQ92698 747 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 TUBGCP2Q9BSJ2 902 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 RAVER2Q9HCJ3 691 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 DDX41Q9UJV9 622 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 PRR12Q9ULL5 1215 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 CAPN11Q9UMQ6 739 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 LUC7L2Q9Y383 392 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 CTDP1Q9Y5B0 961 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 RNF225M0QZC1 329 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 PES1O00541 588 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 TNPO2O14787 897 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 TADA3O75528 432 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 H2AFXP16104 143 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 FCGRTP55899 365 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 TSR1Q2NL82 804 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 TMEM119Q4V9L6 283 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 ARHGAP29Q52LW3 1261 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 OTOP1Q7RTM1 612 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 RETREG2Q8NC44 543 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 KIAA0895Q8NCT3 520 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 CHURC1Q8WUH1 139 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 DNAJC7Q99615 494 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 CARD6Q9BX69 1037 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 MOV10L1Q9BXT6 1211 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 SPATC1LQ9H0A9 340 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 ADAMTS5Q9UNA0 930 aa13.44□□□□□ -0.26
SEC61A1-203ENST00000464451 PARP14Q460N5 1801 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 TTC26A0AVF1 554 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 POTEMA6NI47 508 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 MYMKA6NI61 221 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 MARCH6O60337 910 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 ZBED4O75132 1171 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 CBX1P83916 185 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 MCM6Q14566 821 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 CENPPQ6IPU0 288 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 CTU1Q7Z7A3 348 aaKnown RBP13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 FAM160B2Q86V87 743 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 NCAPG2Q86XI2 1143 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 GTF3C2Q8WUA4 911 aaPredicted RBP13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 HAS1Q92839 578 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 CNOT6LQ96LI5 555 aaKnown RBP13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 GABRQQ9UN88 632 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 MYPNQ86TC9 1320 aa13.43□□□□□ -0.26
SEC61A1-203ENST00000464451 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 B4DLN1 442 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 SLC26A4O43511 780 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 USP11P51784 963 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 PRKCZQ05513 592 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 PPP2R3AQ06190 1150 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 PSMD2Q13200 908 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 TUBB2AQ13885 445 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 QRICH1Q2TAL8 776 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 SYDE2Q5VT97 1194 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 MCTP2Q6DN12 878 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 GUF1Q8N442 669 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 TUBB2BQ9BVA1 445 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 SLC39A2Q9NP94 309 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 MYO1AQ9UBC5 1043 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 ZNF214Q9UL59 606 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 PCDHA12Q9UN75 941 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 RIPK3Q9Y572 518 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 PCDHA1Q9Y5I3 950 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 COL11A1P12107 1806 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 FGFR1OPO95684 399 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 ERCC3P19447 782 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 STAT3P40763 770 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 MTIF2P46199 727 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 TBC1D8BQ0IIM8 1120 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 SNRNP48Q6IEG0 339 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 FOXR2Q6PJQ5 311 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 ACRBPQ8NEB7 543 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 IQCDQ96DY2 449 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 AGBL1Q96MI9 1066 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 IRX2Q9BZI1 471 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 NT5C3AQ9H0P0 336 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 SEMA6BQ9H3T3 888 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 HOMER2Q9NSB8 354 aa13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 ARGLU1Q9NWB6 273 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 EPN1Q9Y6I3 576 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-203ENST00000464451 A0A0G2JMZ2 1700 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 NDUFA10O95299 355 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 TRIM21P19474 475 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 CYP3A7P24462 503 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 CCNA1P78396 465 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 LRRC63Q05C16 580 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 AP3B2Q13367 1082 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 CDC37Q16543 378 aaPredicted RBP13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 HYIQ5T013 277 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 DYMQ7RTS9 669 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 GPR142Q7Z601 462 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 DDX12PQ92771 950 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 NUDT12Q9BQG2 462 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 NOC4LQ9BVI4 516 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 MCOLN1Q9GZU1 580 aa13.41□□□□□ -0.26
SEC61A1-203ENST00000464451 CTAGE9A4FU28 777 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms