RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 MBLAC1A4D2B0 266 aaPredicted RBP21.5■■□□□ 1.03
SF3A1-205ENST00000463818 RRN3P2A6NIE6 340 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 LPXNO60711 386 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 INSRRP14616 1297 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 IGBP1P78318 339 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 SKIV2LQ15477 1246 aaKnown RBP21.5■■□□□ 1.03
SF3A1-205ENST00000463818 PKN1Q16512 942 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 RSPH3Q86UC2 560 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 DNAJB3Q8WWF6 145 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 APBB2Q92870 758 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 TUBE1Q9UJT0 475 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 MTUS1Q9ULD2 1270 aa21.5■■□□□ 1.03
SF3A1-205ENST00000463818 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.49■■□□□ 1.03
SF3A1-205ENST00000463818 ADAMTS3O15072 1205 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 STAT5BP51692 787 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 HTRA4P83105 476 aaPredicted RBP21.49■■□□□ 1.03
SF3A1-205ENST00000463818 PLCB4Q15147 1175 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 PLPPR4Q7Z2D5 763 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 PHKBQ93100 1093 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 TOP1MTQ969P6 601 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 IFIH1Q9BYX4 1025 aaKnown RBP21.49■■□□□ 1.03
SF3A1-205ENST00000463818 ZMYND12Q9H0C1 365 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 SUGCTQ9HAC7 445 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 C6orf50Q9HD87 102 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 DOCK5Q9H7D0 1870 aa21.49■■□□□ 1.03
SF3A1-205ENST00000463818 ESYT2A0FGR8 921 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 FAM86B1E9PN63 330 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 PPFIA3O75145 1194 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 UPP2O95045 317 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 ATG7O95352 703 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 FAM86B2P0C5J1 330 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 AKAP17AQ02040 695 aaKnown RBP21.48■■□□□ 1.03
SF3A1-205ENST00000463818 MGAT3Q09327 533 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 NTRK3Q16288 839 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 NIPA1Q7RTP0 329 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 PLA2G4DQ86XP0 818 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 CCDC12Q8WUD4 166 aaPredicted RBP21.48■■□□□ 1.03
SF3A1-205ENST00000463818 TNPO1Q92973 898 aaKnown RBP21.48■■□□□ 1.03
SF3A1-205ENST00000463818 ZBTB10Q96DT7 871 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 TRPC6Q9Y210 931 aa21.48■■□□□ 1.03
SF3A1-205ENST00000463818 PRRC2BQ5JSZ5 2229 aaKnown RBP21.47■■□□□ 1.03
SF3A1-205ENST00000463818 DDX39AO00148 427 aaKnown RBP21.47■■□□□ 1.03
SF3A1-205ENST00000463818 CYP3A4P08684 503 aa21.47■■□□□ 1.03
SF3A1-205ENST00000463818 GHRP10912 638 aa21.47■■□□□ 1.03
SF3A1-205ENST00000463818 PDIA3P30101 505 aaKnown RBP21.47■■□□□ 1.03
SF3A1-205ENST00000463818 LPIN1Q14693 890 aa21.47■■□□□ 1.03
SF3A1-205ENST00000463818 GDPD5Q8WTR4 605 aa21.47■■□□□ 1.03
SF3A1-205ENST00000463818 CRYGNQ8WXF5 182 aa21.47■■□□□ 1.03
SF3A1-205ENST00000463818 LMCD1Q9NZU5 365 aa21.47■■□□□ 1.03
SF3A1-205ENST00000463818 TTC28Q96AY4 2481 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 CCNE2O96020 404 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 GNA11P29992 359 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 EVCP57679 992 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 CCT2P78371 535 aaKnown RBP21.46■■□□□ 1.03
SF3A1-205ENST00000463818 MCTP2Q6DN12 878 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 ABHD15Q6UXT9 468 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 RUFY3Q7L099 469 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 SP7Q8TDD2 431 aaPredicted RBP21.46■■□□□ 1.03
SF3A1-205ENST00000463818 UIMC1Q96RL1 719 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 C17orf80Q9BSJ5 609 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 SLC26A6Q9BXS9 759 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 FAM49AQ9H0Q0 323 aaPredicted RBP21.46■■□□□ 1.03
SF3A1-205ENST00000463818 ZSWIM6Q9HCJ5 1215 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 CDY2AQ9Y6F7 541 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 NID2Q14112 1375 aa21.46■■□□□ 1.03
SF3A1-205ENST00000463818 VCANP13611 3396 aa21.45■■□□□ 1.02
SF3A1-205ENST00000463818 IGKV6D-21A0A0A0MT36 114 aa21.45■■□□□ 1.02
SF3A1-205ENST00000463818 POTEB3A0JP26 581 aa21.45■■□□□ 1.02
SF3A1-205ENST00000463818 DHX15O43143 795 aaKnown RBP21.45■■□□□ 1.02
SF3A1-205ENST00000463818 EPB41L2O43491 1005 aaKnown RBP21.45■■□□□ 1.02
SF3A1-205ENST00000463818 IFNAR1P17181 557 aa21.45■■□□□ 1.02
SF3A1-205ENST00000463818 MRPS6P82932 125 aaKnown RBP21.45■■□□□ 1.02
SF3A1-205ENST00000463818 TFF2Q03403 129 aa21.45■■□□□ 1.02
SF3A1-205ENST00000463818 POTEBQ6S5H4 581 aa21.45■■□□□ 1.02
SF3A1-205ENST00000463818 REXO1Q8N1G1 1221 aaKnown RBP21.45■■□□□ 1.02
SF3A1-205ENST00000463818 TRAPPC12Q8WVT3 735 aa21.45■■□□□ 1.02
SF3A1-205ENST00000463818 YME1L1Q96TA2 773 aa21.45■■□□□ 1.02
SF3A1-205ENST00000463818 RNF26Q9BY78 433 aaPredicted RBP21.45■■□□□ 1.02
SF3A1-205ENST00000463818 NCOA5Q9HCD5 579 aaKnown RBP21.45■■□□□ 1.02
SF3A1-205ENST00000463818 IGLV3-22A0A075B6J6 115 aa21.44■■□□□ 1.02
SF3A1-205ENST00000463818 ENPP3O14638 875 aa21.44■■□□□ 1.02
SF3A1-205ENST00000463818 FBXO47Q5MNV8 452 aa21.44■■□□□ 1.02
SF3A1-205ENST00000463818 IL27Q8NEV9 243 aa21.44■■□□□ 1.02
SF3A1-205ENST00000463818 ADAMTS19Q8TE59 1207 aa21.44■■□□□ 1.02
SF3A1-205ENST00000463818 PCDHA2Q9Y5H9 948 aa21.44■■□□□ 1.02
SF3A1-205ENST00000463818 PTPRSQ13332 1948 aa21.44■■□□□ 1.02
SF3A1-205ENST00000463818 IPO5O00410 1097 aaKnown RBP21.43■■□□□ 1.02
SF3A1-205ENST00000463818 BACH1O14867 736 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 RPLP2P05387 115 aaKnown RBP21.43■■□□□ 1.02
SF3A1-205ENST00000463818 NEFLP07196 543 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 BMP1P13497 986 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 SLC26A2P50443 739 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 TOB2Q14106 344 aaPredicted RBP21.43■■□□□ 1.02
SF3A1-205ENST00000463818 AAK1Q2M2I8 961 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 IER5Q5VY09 327 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 ERICH6BQ5W0A0 696 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 FAM160B1Q5W0V3 765 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 FBXO22Q8NEZ5 403 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 BICD2Q8TD16 824 aa21.43■■□□□ 1.02
SF3A1-205ENST00000463818 RASGRP4Q8TDF6 673 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms