RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ERVK-21P61565 698 aa23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 SP7Q8TDD2 431 aaPredicted RBP23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 ARNTL2Q8WYA1 636 aa23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 OSBPL7Q9BZF2 842 aa23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 ZSWIM6Q9HCJ5 1215 aa23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 C6orf50Q9HD87 102 aa23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 LMCD1Q9NZU5 365 aa23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 TUBE1Q9UJT0 475 aa23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 NAP1L2Q9ULW6 460 aaPredicted RBP23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 INSL6Q9Y581 213 aa23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 PRRC2BQ5JSZ5 2229 aaKnown RBP23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 SPTBN5Q9NRC6 3674 aaKnown RBP23.43■■□□□ 1.34
PDLIM4-205ENST00000463615 COL4A6Q14031 1691 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 IGKV6D-21A0A0A0MT36 114 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 RFXAPO00287 272 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 LPXNO60711 386 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 CHRNA1P02708 482 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 IFNAR1P17181 557 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 SLC26A2P50443 739 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 MGAT3Q09327 533 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 RUFY4Q6ZNE9 571 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 RUFY3Q7L099 469 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 RSPH3Q86UC2 560 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 PPM1EQ8WY54 764 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 TM6SF1Q9BZW5 370 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 AZI2Q9H6S1 392 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 CERS4Q9HA82 394 aa23.42■■□□□ 1.34
PDLIM4-205ENST00000463615 IGLV3-22A0A075B6J6 115 aa23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 LINC01553A4QN01 128 aa23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 FAM86B1E9PN63 330 aa23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 FAM86B2P0C5J1 330 aa23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 GNA11P29992 359 aa23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 PDIA3P30101 505 aaKnown RBP23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 CCDC85BQ15834 202 aaPredicted RBP23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 TOP1MTQ969P6 601 aa23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 TGS1Q96RS0 853 aaKnown RBP23.41■■□□□ 1.34
PDLIM4-205ENST00000463615 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 DHX15O43143 795 aaKnown RBP23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 INSRRP14616 1297 aa23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 MARK3P27448 753 aa23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 STAT5BP51692 787 aa23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 GRB10Q13322 594 aa23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 JAKMIP3Q5VZ66 844 aa23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 SPRED2Q7Z698 418 aa23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 REXO1Q8N1G1 1221 aaKnown RBP23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 ASB2Q96Q27 587 aa23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 IFIH1Q9BYX4 1025 aaKnown RBP23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 TSPYL2Q9H2G4 693 aaPredicted RBP23.4■■□□□ 1.34
PDLIM4-205ENST00000463615 CCNE2O96020 404 aa23.39■■□□□ 1.33
PDLIM4-205ENST00000463615 ZNF76P36508 570 aa23.39■■□□□ 1.33
PDLIM4-205ENST00000463615 MRPS5P82675 430 aaKnown RBP23.39■■□□□ 1.33
PDLIM4-205ENST00000463615 TOB2Q14106 344 aaPredicted RBP23.39■■□□□ 1.33
PDLIM4-205ENST00000463615 PLCB4Q15147 1175 aa23.39■■□□□ 1.33
PDLIM4-205ENST00000463615 ABHD15Q6UXT9 468 aa23.39■■□□□ 1.33
PDLIM4-205ENST00000463615 MYOCDQ8IZQ8 938 aa23.39■■□□□ 1.33
PDLIM4-205ENST00000463615 SQORQ9Y6N5 450 aa23.39■■□□□ 1.33
PDLIM4-205ENST00000463615 ADAMTS3O15072 1205 aa23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 CIITAP33076 1130 aa23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 SETQ01105 290 aaPredicted RBP23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 AKAP17AQ02040 695 aaKnown RBP23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 PLA2G4DQ86XP0 818 aa23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 CCDC148Q8NFR7 591 aa23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 BICD2Q8TD16 824 aa23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 PHKBQ93100 1093 aa23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 SH3GLB2Q9NR46 395 aa23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 PCDHA2Q9Y5H9 948 aa23.38■■□□□ 1.33
PDLIM4-205ENST00000463615 NEFLP07196 543 aa23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 LPIN1Q14693 890 aa23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 FBXO47Q5MNV8 452 aa23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 FAM43BQ6ZT52 329 aaPredicted RBP23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 DNAJB3Q8WWF6 145 aa23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 ZNF274Q96GC6 653 aaPredicted RBP23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 SUGCTQ9HAC7 445 aa23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 TBC1D22BQ9NU19 505 aa23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 CYP46A1Q9Y6A2 500 aa23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 SIP14410 1827 aa23.37■■□□□ 1.33
PDLIM4-205ENST00000463615 COL4A4P53420 1690 aaPredicted RBP23.36■■□□□ 1.33
PDLIM4-205ENST00000463615 IPO5O00410 1097 aaKnown RBP23.36■■□□□ 1.33
PDLIM4-205ENST00000463615 MRPS6P82932 125 aaKnown RBP23.36■■□□□ 1.33
PDLIM4-205ENST00000463615 ERICH6BQ5W0A0 696 aa23.36■■□□□ 1.33
PDLIM4-205ENST00000463615 FAM117BQ6P1L5 589 aa23.36■■□□□ 1.33
PDLIM4-205ENST00000463615 FAM177A1Q8N128 213 aaPredicted RBP23.36■■□□□ 1.33
PDLIM4-205ENST00000463615 SAMD11Q96NU1 681 aa23.36■■□□□ 1.33
PDLIM4-205ENST00000463615 TRPC6Q9Y210 931 aa23.36■■□□□ 1.33
PDLIM4-205ENST00000463615 POTEB3A0JP26 581 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 RBAK-RBAKDNI3L0D1 243 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 GHRP10912 638 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 IER5Q5VY09 327 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 FAM160B1Q5W0V3 765 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 ZNF746Q6NUN9 644 aaPredicted RBP23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 POTEBQ6S5H4 581 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 TSHZ1Q6ZSZ6 1077 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 SLC26A6Q9BXS9 759 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 COG5Q9UP83 839 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 CDY2AQ9Y6F7 541 aa23.35■■□□□ 1.33
PDLIM4-205ENST00000463615 KDM3AQ9Y4C1 1321 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 SMIM35A0A1B0GVV1 85 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 HBP1O60381 514 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 IGBP1P78318 339 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 CCT2P78371 535 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms