RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 INSL6Q9Y581 213 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 NID2Q14112 1375 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 WDR81Q562E7 1941 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 LOXHD1Q8IVV2 1947 aa8.3□□□□□ -1.08
PTPRF-210ENST00000463041 TTC3P53804 2025 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 BRWD1Q9NSI6 2320 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 GTPBP6O43824 516 aaPredicted RBP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 EIF5BO60841 1220 aaKnown RBP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 CHRNA1P02708 482 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 AMHP03971 560 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 INSRRP14616 1297 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 MARK3P27448 753 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 SLC26A2P50443 739 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 CCT2P78371 535 aaKnown RBP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 DEFB103AP81534 67 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 GRIK4Q16099 956 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 TCTN1Q2MV58 587 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 MARCH8Q5T0T0 291 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 ABHD15Q6UXT9 468 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 FAM43BQ6ZT52 329 aaPredicted RBP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 PLA2G4DQ86XP0 818 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 FAM177A1Q8N128 213 aaPredicted RBP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 REXO1Q8N1G1 1221 aaKnown RBP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 NME8Q8N427 588 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 CCDC148Q8NFR7 591 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 ATXN2LQ8WWM7 1075 aaKnown RBP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 CRYGNQ8WXF5 182 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 PPM1EQ8WY54 764 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 PHKBQ93100 1093 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 TOP1MTQ969P6 601 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 PGBD1Q96JS3 809 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 PCYT2Q99447 389 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 COL25A1Q9BXS0 654 aaPredicted RBP8.29□□□□□ -1.08
PTPRF-210ENST00000463041 SLC26A6Q9BXS9 759 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 TBC1D22BQ9NU19 505 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 PKD2L1Q9P0L9 805 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 SQORQ9Y6N5 450 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 MYO7AQ13402 2215 aa8.29□□□□□ -1.08
PTPRF-210ENST00000463041 IGKV6D-21A0A0A0MT36 114 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 FAM86B1E9PN63 330 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 RFXAPO00287 272 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 IPO5O00410 1097 aaKnown RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 DHX15O43143 795 aaKnown RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 HBP1O60381 514 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 FAM86B2P0C5J1 330 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 CIITAP33076 1130 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 USP11P51784 963 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 ERVK-21P61565 698 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 HTRA4P83105 476 aaPredicted RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 SSRP1Q08945 709 aaKnown RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 ITGB3BPQ13352 177 aaPredicted RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 TOB2Q14106 344 aaPredicted RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 PLCB4Q15147 1175 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 CCDC85BQ15834 202 aaPredicted RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 IER5Q5VY09 327 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 FAM160B1Q5W0V3 765 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 MIS18BP1Q6P0N0 1132 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 CPLX2Q6PUV4 134 aaKnown RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 TRIM22Q8IYM9 498 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 USP38Q8NB14 1042 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 DNAJB3Q8WWF6 145 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 ARNTL2Q8WYA1 636 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 TGS1Q96RS0 853 aaKnown RBP8.28□□□□□ -1.08
PTPRF-210ENST00000463041 C22orf23Q9BZE7 217 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 CERS4Q9HA82 394 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 TUBE1Q9UJT0 475 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 PCDHA2Q9Y5H9 948 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 MTCH2Q9Y6C9 303 aa8.28□□□□□ -1.08
PTPRF-210ENST00000463041 SPTBN5Q9NRC6 3674 aaKnown RBP8.27□□□□□ -1.08
PTPRF-210ENST00000463041 IGLV3-22A0A075B6J6 115 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 SMIM35A0A1B0GVV1 85 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 LCHNA4D1U4 455 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 ENPP3O14638 875 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 CPLX1O14810 134 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 BACH1O14867 736 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 ARHGEF15O94989 841 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 CTSHP09668 335 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 NLRP5P59047 1200 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 IGBP1P78318 339 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 MRPS5P82675 430 aaKnown RBP8.27□□□□□ -1.09
PTPRF-210ENST00000463041 SETQ01105 290 aaPredicted RBP8.27□□□□□ -1.09
PTPRF-210ENST00000463041 MGAT3Q09327 533 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 TJAP1Q5JTD0 557 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 ZNF484Q5JVG2 852 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 GALNT17Q6IS24 598 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 ZNF746Q6NUN9 644 aaPredicted RBP8.27□□□□□ -1.09
PTPRF-210ENST00000463041 SWSAP1Q6NVH7 229 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 FAM117BQ6P1L5 589 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 RUFY4Q6ZNE9 571 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 TMCO2Q7Z6W1 182 aaPredicted RBP8.27□□□□□ -1.09
PTPRF-210ENST00000463041 SMAP1Q8IYB5 467 aaPredicted RBP8.27□□□□□ -1.09
PTPRF-210ENST00000463041 MYOCDQ8IZQ8 938 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 SAMD11Q96NU1 681 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 ZNF577Q9BSK1 485 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms