RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PRKAB2O43741 272 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 HARSP12081 509 aaKnown RBP17.05■□□□□ 0.32
SMC4-204ENST00000462787 TNNI1P19237 187 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 KAZNQ674X7 775 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 ATG16L1Q676U5 607 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 NT5C1BQ96P26 610 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 VCPKMTQ9H867 229 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 ZRANB2O95218 330 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMC4-204ENST00000462787 AGGF1Q8N302 714 aaeCLIP17.05■□□□□ 0.322e-85■■■■■ 286.7
SMC4-204ENST00000462787 MXD3Q9BW11 206 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 USP15Q9Y4E8 981 aaPredicted RBP17.05■□□□□ 0.32
SMC4-204ENST00000462787 SGK1O00141 431 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 KRT14P02533 472 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 MRPS35P82673 323 aaKnown RBP17.05■□□□□ 0.32
SMC4-204ENST00000462787 CUL3Q13618 768 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 FAM81BQ96LP2 452 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 MOV10L1Q9BXT6 1211 aaKnown RBP17.05■□□□□ 0.32
SMC4-204ENST00000462787 PACSIN2Q9UNF0 486 aaPredicted RBP17.05■□□□□ 0.32
SMC4-204ENST00000462787 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 TRPM8Q7Z2W7 1104 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 TRAPPC11Q7Z392 1133 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 CDKL2Q92772 493 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 NOD2Q9HC29 1040 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 SCINQ9Y6U3 715 aa17.05■□□□□ 0.32
SMC4-204ENST00000462787 PALLDQ8WX93 1383 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 SSU72P8A0A1W2PR75 194 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 PLS3P13797 630 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 SEC24CP53992 1094 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 PACS2Q86VP3 889 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 H7C1W4 665 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 DAPK3O43293 454 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 STAM2O75886 525 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 ATP2C1P98194 919 aaPredicted RBP17.04■□□□□ 0.32
SMC4-204ENST00000462787 CDC37Q16543 378 aaPredicted RBP17.04■□□□□ 0.32
SMC4-204ENST00000462787 CENPUQ71F23 418 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 IL25Q9H293 177 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
SMC4-204ENST00000462787 PRAMEF22A3QJZ6 481 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 PHF20L1A8MW92 1017 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 GARSP41250 739 aaKnown RBP17.04■□□□□ 0.32
SMC4-204ENST00000462787 DPYDQ12882 1025 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 ALX1Q15699 326 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 NXNQ6DKJ4 435 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 SRRM1Q8IYB3 904 aaKnown RBP17.04■□□□□ 0.32
SMC4-204ENST00000462787 ASPHQ12797 758 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 GRAMD1BQ3KR37 738 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 KRT26Q7Z3Y9 468 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 SERPINI1Q99574 410 aa17.04■□□□□ 0.32
SMC4-204ENST00000462787 IQANK1A0A1B0GTG1 560 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 LRRN2O75325 713 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 PLEKHA8P1O95397 391 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 FOSP01100 380 aaPredicted RBP17.03■□□□□ 0.32
SMC4-204ENST00000462787 IGKV5-2P06315 115 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 GYG1P46976 350 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 PABPC4Q13310 644 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■■■■■ 455.6
SMC4-204ENST00000462787 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 TTC25Q96NG3 672 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 EFHD1Q9BUP0 239 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 NEDD4P46934 1319 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 CHN1P15882 459 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 AP2B1P63010 937 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 MYCBPAPQ8TBZ2 947 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 CYTH2Q99418 400 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 ANKZF1Q9H8Y5 726 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 ARHGEF10LQ9HCE6 1279 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 TRIM10Q9UDY6 481 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 A0A0G2JND7 137 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 POLR2BP30876 1174 aaKnown RBP17.03■□□□□ 0.32
SMC4-204ENST00000462787 PHEXP78562 749 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 GUF1Q8N442 669 aaKnown RBP17.03■□□□□ 0.32
SMC4-204ENST00000462787 RBM12Q9NTZ6 932 aaKnown RBP17.03■□□□□ 0.32
SMC4-204ENST00000462787 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 TRPA1O75762 1119 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 PLA2G4BP0C869 781 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 USH1GQ495M9 461 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 ODR4Q5SWX8 454 aa17.03■□□□□ 0.32
SMC4-204ENST00000462787 PPP1R1BQ9UD71 204 aaPredicted RBP17.03■□□□□ 0.32
SMC4-204ENST00000462787 FRMPD2Q68DX3 1309 aaPredicted RBP17.03■□□□□ 0.32
SMC4-204ENST00000462787 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.32
SMC4-204ENST00000462787 ECM2O94769 699 aaPredicted RBP17.02■□□□□ 0.32
SMC4-204ENST00000462787 GGPS1O95749 300 aa17.02■□□□□ 0.32
SMC4-204ENST00000462787 ASPRV1Q53RT3 343 aa17.02■□□□□ 0.32
SMC4-204ENST00000462787 KRT80Q6KB66 452 aa17.02■□□□□ 0.32
SMC4-204ENST00000462787 LRGUKQ96M69 825 aa17.02■□□□□ 0.32
SMC4-204ENST00000462787 WDR91A4D1P6 747 aa17.02■□□□□ 0.32
SMC4-204ENST00000462787 DDX39AO00148 427 aaKnown RBP17.02■□□□□ 0.32
SMC4-204ENST00000462787 TRIP13Q15645 432 aaPredicted RBP17.02■□□□□ 0.32
SMC4-204ENST00000462787 PFKFB3Q16875 520 aaPredicted RBP17.02■□□□□ 0.32
SMC4-204ENST00000462787 MRPL47Q9HD33 250 aaKnown RBP17.02■□□□□ 0.32
SMC4-204ENST00000462787 ZNF446Q9NWS9 450 aa17.02■□□□□ 0.32
SMC4-204ENST00000462787 MROH7-TTC4A0A0A0MT08 1334 aa17.02■□□□□ 0.32
SMC4-204ENST00000462787 ARHGAP10A1A4S6 786 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 TRIML2Q8N7C3 387 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 CEP70Q8NHQ1 597 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 TEKT1Q969V4 418 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 NDE1Q9NXR1 346 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 CPDO75976 1380 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms