RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 RNF26Q9BY78 433 aaPredicted RBP10.08□□□□□ -0.8
LDB1-203ENST00000461873 IFIH1Q9BYX4 1025 aaKnown RBP10.08□□□□□ -0.8
LDB1-203ENST00000461873 BCAS3Q9H6U6 928 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 TBC1D22BQ9NU19 505 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 MTUS1Q9ULD2 1270 aa10.08□□□□□ -0.8
LDB1-203ENST00000461873 GSTTP1A0A1W2PQM5 241 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 POTEB3A0JP26 581 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 MARCH6O60337 910 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 SREBF1P36956 1147 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 ACTR2P61160 394 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 DEFB103AP81534 67 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 TAP1Q03518 808 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 PTPROQ16827 1216 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 PLEKHG4Q58EX7 1191 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 POTEBQ6S5H4 581 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 NIPA1Q7RTP0 329 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 PLPPR4Q7Z2D5 763 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 DNAJB3Q8WWF6 145 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 PHKBQ93100 1093 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 SAMD11Q96NU1 681 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 CTAGE1Q96RT6 745 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 COL25A1Q9BXS0 654 aaPredicted RBP10.07□□□□□ -0.8
LDB1-203ENST00000461873 FAM49AQ9H0Q0 323 aaPredicted RBP10.07□□□□□ -0.8
LDB1-203ENST00000461873 AGO4Q9HCK5 861 aaKnown RBP10.07□□□□□ -0.8
LDB1-203ENST00000461873 ZNF302Q9NR11 478 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 PDRG1Q9NUG6 133 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 TMEM260Q9NX78 707 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 CEP131Q9UPN4 1083 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 CDH23Q9H251 3354 aa10.07□□□□□ -0.8
LDB1-203ENST00000461873 ESYT2A0FGR8 921 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 IPO5O00410 1097 aaKnown RBP10.06□□□□□ -0.8
LDB1-203ENST00000461873 HBP1O60381 514 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 PSAPP07602 524 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 ARP10275 920 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 INSRRP14616 1297 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 ANKRD1Q15327 319 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 TRIM71Q2Q1W2 868 aaKnown RBP10.06□□□□□ -0.8
LDB1-203ENST00000461873 PRR16Q569H4 304 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 PDXDC2PQ6P474 469 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 SMAP1Q8IYB5 467 aaPredicted RBP10.06□□□□□ -0.8
LDB1-203ENST00000461873 NME8Q8N427 588 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 USP38Q8NB14 1042 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 FBXO22Q8NEZ5 403 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 KCNB2Q92953 911 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 WNT8BQ93098 351 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 FTHL17Q9BXU8 183 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 ZMYND12Q9H0C1 365 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 LMCD1Q9NZU5 365 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 LRFN2Q9ULH4 789 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 COG5Q9UP83 839 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 GINS2Q9Y248 185 aa10.06□□□□□ -0.8
LDB1-203ENST00000461873 RFXAPO00287 272 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 MEIS1O00470 390 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 DEXIO95424 95 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 STAG3L1P0CL83 205 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 GHRP10912 638 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 IFNAR1P17181 557 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 TMOD1P28289 359 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 PDIA3P30101 505 aaKnown RBP10.05□□□□□ -0.8
LDB1-203ENST00000461873 MRPS6P82932 125 aaKnown RBP10.05□□□□□ -0.8
LDB1-203ENST00000461873 KRT76Q01546 638 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 PAK2Q13177 524 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 STK3Q13188 491 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 ADGRE1Q14246 886 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.05□□□□□ -0.8
LDB1-203ENST00000461873 TRMT1LQ7Z2T5 733 aaKnown RBP10.05□□□□□ -0.8
LDB1-203ENST00000461873 TMCO2Q7Z6W1 182 aaPredicted RBP10.05□□□□□ -0.8
LDB1-203ENST00000461873 FBXL16Q8N461 479 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 FIBCD1Q8N539 461 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 CYP2W1Q8TAV3 490 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 WASF1Q92558 559 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 IL17RAQ96F46 866 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 ASB2Q96Q27 587 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 SLKQ9H2G2 1235 aaPredicted RBP10.05□□□□□ -0.8
LDB1-203ENST00000461873 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 SH3GLB2Q9NR46 395 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 VPS54Q9P1Q0 977 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 RWDD3Q9Y3V2 267 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 TRPV2Q9Y5S1 764 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 CDY2AQ9Y6F7 541 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 UNC80Q8N2C7 3258 aa10.05□□□□□ -0.8
LDB1-203ENST00000461873 MYH9P35579 1960 aaKnown RBP10.05□□□□□ -0.8
LDB1-203ENST00000461873 GAS7O60861 476 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 PPFIA3O75145 1194 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 CYP3A4P08684 503 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 IBSPP21815 317 aaPredicted RBP10.04□□□□□ -0.8
LDB1-203ENST00000461873 HOXC8P31273 242 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
LDB1-203ENST00000461873 FUT2Q10981 343 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 NFX1Q12986 1120 aaKnown RBP10.04□□□□□ -0.8
LDB1-203ENST00000461873 GRB10Q13322 594 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 MKRN4PQ13434 485 aaPredicted RBP10.04□□□□□ -0.8
LDB1-203ENST00000461873 COL9A3Q14050 684 aaPredicted RBP10.04□□□□□ -0.8
LDB1-203ENST00000461873 HIC1Q14526 733 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 PLCB4Q15147 1175 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 ZNF484Q5JVG2 852 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 FAM26DQ5JW98 314 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 GALNT17Q6IS24 598 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 TYW1BQ6NUM6 668 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms