RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 RGL1Q9NZL6 768 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 MYPNQ86TC9 1320 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 ZC3H4Q9UPT8 1303 aaKnown RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 DOCK5Q9H7D0 1870 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 A0A1B0GTH6 734 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 PSMD10O75832 226 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 SPATA31C1P0DKV0 1188 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 ITGB5P18084 799 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 CYP11B2P19099 503 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 EEF1GP26641 437 aaKnown RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 PMS1P54277 932 aaKnown RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 SLC12A3P55017 1021 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 PSMC6P62333 389 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 UBXN1Q04323 297 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 PDE4CQ08493 712 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 SPIRE1Q08AE8 756 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 GOLGA8FQ08AF8 430 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 GOLGA8DPQ0D2H9 430 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 CCDC40Q4G0X9 1142 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 WDR78Q5VTH9 848 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 ANKRD40Q6AI12 368 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 NELFCDQ8IXH7 590 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 PLPP6Q8IY26 295 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 SYT2Q8N9I0 419 aaPredicted RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 KIAA0895Q8NCT3 520 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 CCDC112Q8NEF3 446 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 NEK9Q8TD19 979 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 NSUN6Q8TEA1 469 aaKnown RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 PIGOQ8TEQ8 1089 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 CPLX3Q8WVH0 158 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 OPTNQ96CV9 577 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 SLC10A4Q96EP9 437 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 CNOT6LQ96LI5 555 aaKnown RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 PURBQ96QR8 312 aaKnown RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 NACC1Q96RE7 527 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 MED15Q96RN5 788 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 RIT2Q99578 217 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 PDCD2LQ9BRP1 358 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 TAF1DQ9H5J8 278 aaPredicted RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 AGO4Q9HCK5 861 aaKnown RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 KCNH7Q9NS40 1196 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 TBC1D22BQ9NU19 505 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 LIMA1Q9UHB6 759 aaKnown RBP7.54□□□□□ -1.2
MSH2-204ENST00000461394 RIPK3Q9Y572 518 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.54□□□□□ -1.2
MSH2-204ENST00000461394 UBIAD1Q9Y5Z9 338 aa7.54□□□□□ -1.2
MSH2-204ENST00000461394 A0A0G2JMZ2 1700 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 SPDYE5A6NIY4 337 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 AKR1B15C9JRZ8 316 aaPredicted RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 TRAF5O00463 557 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 CXCL11O14625 94 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 TEX33O43247 280 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 SORBS3O60504 671 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 NR3C2P08235 984 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 BCRP11274 1271 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 GAP43P17677 238 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 JAK3P52333 1124 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 SP4Q02446 784 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 PPIL2Q13356 520 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 GIT2Q14161 759 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 NR1I3Q14994 352 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 GNPTABQ3T906 1256 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 FKBP15Q5T1M5 1219 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 TTI2Q6NXR4 508 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 ARMCX5Q6P1M9 558 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 XRRA1Q6P2D8 792 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 STXBP4Q6ZWJ1 553 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 ILDR2Q71H61 639 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 FASTKD5Q7L8L6 764 aaKnown RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 TRMT1LQ7Z2T5 733 aaKnown RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 SFR1Q86XK3 245 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 GUF1Q8N442 669 aaKnown RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 MYCT1Q8N699 235 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 MB21D1Q8N884 522 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 PROCA1Q8NCQ7 364 aaPredicted RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 CHST13Q8NET6 341 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 REPS2Q8NFH8 660 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 KIAA1524Q8TCG1 905 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 DNAJC19Q96DA6 116 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 MPHOSPH6Q99547 160 aaKnown RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 REEP2Q9BRK0 252 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 LXNQ9BS40 222 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 NOC4LQ9BVI4 516 aaKnown RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 MRPL44Q9H9J2 332 aaKnown RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 INTS13Q9NVM9 706 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 ADD3Q9UEY8 706 aaKnown RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 FBXO40Q9UH90 709 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 ZNF214Q9UL59 606 aaPredicted RBP7.53□□□□□ -1.2
MSH2-204ENST00000461394 COL4A3BPQ9Y5P4 624 aa7.53□□□□□ -1.2
MSH2-204ENST00000461394 PFASO15067 1338 aa7.52□□□□□ -1.2
MSH2-204ENST00000461394 FRMPD4Q14CM0 1322 aa7.52□□□□□ -1.2
MSH2-204ENST00000461394 A0A0G2JLL6 359 aaPredicted RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 B4DLN1 442 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 POTEB2H3BUK9 544 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 ATP2A1O14983 1001 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 CCP110O43303 1012 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 CALUO43852 315 aaPredicted RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 SLITRK3O94933 977 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 GCNT3O95395 438 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 P4HBP07237 508 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms