RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 JPH1Q9HDC5 661 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-216ENST00000461187 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
SMPD4-216ENST00000461187 PTPROQ16827 1216 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 LEXMQ3ZCV2 418 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 FBXO47Q5MNV8 452 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 RNF20Q5VTR2 975 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 RSPH3Q86UC2 560 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 IL17RAQ96F46 866 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 TCEANC2Q96MN5 208 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 RIC8AQ9NPQ8 531 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 RBM28Q9NW13 759 aaKnown RBP16.82■□□□□ 0.28
SMPD4-216ENST00000461187 SLC9A2Q9UBY0 812 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 CDY2AQ9Y6F7 541 aa16.82■□□□□ 0.28
SMPD4-216ENST00000461187 NFASCO94856 1347 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 RRN3P2A6NIE6 340 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 ENPP3O14638 875 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 LINC00271P0C7V0 271 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 INSRRP14616 1297 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 KCNA5P22460 613 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 NAPAP54920 295 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 IGBP1P78318 339 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 TIGD5Q53EQ6 642 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-216ENST00000461187 KHSRPQ92945 711 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMPD4-216ENST00000461187 ZBTB10Q96DT7 871 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 PGBD1Q96JS3 809 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 RC3H2Q9HBD1 1191 aaKnown RBP16.81■□□□□ 0.28
SMPD4-216ENST00000461187 CD320Q9NPF0 282 aa16.81■□□□□ 0.28
SMPD4-216ENST00000461187 STXBP3O00186 592 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 ZBTB43O43298 467 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 FOSP01100 380 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-216ENST00000461187 ARP10275 920 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 ACTR2P61160 394 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 MRPS6P82932 125 aaKnown RBP16.8■□□□□ 0.28
SMPD4-216ENST00000461187 RTN1Q16799 776 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 ADCK5Q3MIX3 580 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 PPP1R18Q6NYC8 613 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 TSHZ1Q6ZSZ6 1077 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 DHX32Q7L7V1 743 aaKnown RBP16.8■□□□□ 0.28
SMPD4-216ENST00000461187 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 FIBCD1Q8N539 461 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 BANK1Q8NDB2 785 aa16.8■□□□□ 0.28
SMPD4-216ENST00000461187 AGO3Q9H9G7 860 aaKnown RBP16.8■□□□□ 0.28
SMPD4-216ENST00000461187 FAM217BQ9NTX9 383 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-216ENST00000461187 V9GY48 417 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-216ENST00000461187 ADGRA3Q8IWK6 1321 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 C5orf67F2Z3F1 127 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 ADCY7P51828 1080 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 ITGB3BPQ13352 177 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-216ENST00000461187 PLCB4Q15147 1175 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 CEP55Q53EZ4 464 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 TCEAL5Q5H9L2 206 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 NEK9Q8TD19 979 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 LINC01599Q8WXQ3 324 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 ZNF689Q96CS4 500 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-216ENST00000461187 SDF4Q9BRK5 362 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 ANO3Q9BYT9 981 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 FAM49AQ9H0Q0 323 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-216ENST00000461187 AZI2Q9H6S1 392 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 AGO4Q9HCK5 861 aaKnown RBP16.79■□□□□ 0.28
SMPD4-216ENST00000461187 BARHL2Q9NY43 387 aa16.79■□□□□ 0.28
SMPD4-216ENST00000461187 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 hCG_1984214I3L0E3 225 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 MEIS1O00470 390 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 ATG7O95352 703 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 RPLP2P05387 115 aaKnown RBP16.78■□□□□ 0.28
SMPD4-216ENST00000461187 RB1P06400 928 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 IL9P15248 144 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 CDC27P30260 824 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 CTNNB1P35222 781 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 BMPR1AP36894 532 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 SREBF1P36956 1147 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
SMPD4-216ENST00000461187 STAT5BP51692 787 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 COL19A1Q14993 1142 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 PTCRAQ6ISU1 281 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-216ENST00000461187 PLPPR4Q7Z2D5 763 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 RTN4RL1Q86UN2 441 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-216ENST00000461187 FAM178BQ8IXR5 827 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 ZNF713Q8N859 430 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-216ENST00000461187 TRAPPC12Q8WVT3 735 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
SMPD4-216ENST00000461187 NSUN3Q9H649 340 aaKnown RBP16.78■□□□□ 0.28
SMPD4-216ENST00000461187 TMEM260Q9NX78 707 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 TRPC6Q9Y210 931 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 PCDHA2Q9Y5H9 948 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 SQORQ9Y6N5 450 aa16.78■□□□□ 0.28
SMPD4-216ENST00000461187 KLF18A0A0U1RQI7 1052 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 GRXCR2A6NFK2 248 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 GOLGA8AA7E2F4 631 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 GOLGA8BA8MQT2 603 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 DGKIO75912 1065 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 CD52P31358 61 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 TMEM62Q0P6H9 643 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 AP3B2Q13367 1082 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 IER5Q5VY09 327 aa16.77■□□□□ 0.28
SMPD4-216ENST00000461187 CENPQQ7L2Z9 268 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms