RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 SLC16A2P36021 539 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 HERVK_113P62684 666 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 CCT2P78371 535 aaKnown RBP6.84□□□□□ -1.31
NUP98-208ENST00000461047 TKFCQ3LXA3 575 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 TREML2Q5T2D2 321 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 MCTP2Q6DN12 878 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 LBX2Q6XYB7 198 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 C20orf204Q6ZNR8 217 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 MCF2L2Q86YR7 1114 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 TEX2Q8IWB9 1127 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 ADGRF4Q8IZF3 695 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 FAM177A1Q8N128 213 aaPredicted RBP6.84□□□□□ -1.31
NUP98-208ENST00000461047 ZNF713Q8N859 430 aaPredicted RBP6.84□□□□□ -1.31
NUP98-208ENST00000461047 NUP88Q99567 741 aaPredicted RBP6.84□□□□□ -1.31
NUP98-208ENST00000461047 MYL10Q9BUA6 226 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 AMNQ9BXJ7 453 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 TEX13BQ9BXU2 312 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 RNF26Q9BY78 433 aaPredicted RBP6.84□□□□□ -1.31
NUP98-208ENST00000461047 UBA5Q9GZZ9 404 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 MAF1Q9H063 256 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 SAGE1Q9NXZ1 904 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 SLC5A4Q9NY91 659 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 FBXO40Q9UH90 709 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 MAD2L2Q9UI95 211 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 TPCN1Q9ULQ1 816 aa6.84□□□□□ -1.31
NUP98-208ENST00000461047 MRPL11Q9Y3B7 192 aaKnown RBP6.84□□□□□ -1.31
NUP98-208ENST00000461047 CDK5RAP2Q96SN8 1893 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 LAMB1P07942 1786 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.83□□□□□ -1.32
NUP98-208ENST00000461047 B4DLN1 442 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 ATP2A1O14983 1001 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 PRPF3O43395 683 aaKnown RBP6.83□□□□□ -1.32
NUP98-208ENST00000461047 TLR2O60603 784 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 TRPA1O75762 1119 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 SASH3O75995 380 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 MAP3K6O95382 1288 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 CPB1P15086 417 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 RXRAP19793 462 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 PDCP20941 246 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 HOXD10P28358 340 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 MAPK4P31152 587 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 STAT3P40763 770 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 MRPL12P52815 198 aaKnown RBP6.83□□□□□ -1.32
NUP98-208ENST00000461047 DOC2BQ14184 412 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 ME3Q16798 604 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 TTBK2Q6IQ55 1244 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 TMTC3Q6ZXV5 915 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 FBXO11Q86XK2 927 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 HOMER1Q86YM7 354 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 TREML1Q86YW5 311 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 RGL4Q8IZJ4 473 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 CPXCR1Q8N123 301 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 CMTR1Q8N1G2 835 aaKnown RBP6.83□□□□□ -1.32
NUP98-208ENST00000461047 FAM43AQ8N2R8 423 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 CCDC82Q8N4S0 544 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 SAMD3Q8N6K7 520 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 CCDC148Q8NFR7 591 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 CUL5Q93034 780 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 GTF3C6Q969F1 213 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 TMX3Q96JJ7 454 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 MPHOSPH6Q99547 160 aaKnown RBP6.83□□□□□ -1.32
NUP98-208ENST00000461047 PAGR1Q9BTK6 254 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 SLC26A6Q9BXS9 759 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 MROH8Q9H579 483 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 RIOX1Q9H6W3 641 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 JMJD4Q9H9V9 463 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 SLC38A10Q9HBR0 1119 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 BRMS1Q9HCU9 246 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 MAP3K20Q9NYL2 800 aaKnown RBP6.83□□□□□ -1.32
NUP98-208ENST00000461047 CCPG1Q9ULG6 757 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 SMC3Q9UQE7 1217 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 PCDHA1Q9Y5I3 950 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 TRPM7Q96QT4 1865 aa6.83□□□□□ -1.32
NUP98-208ENST00000461047 DOCK1Q14185 1865 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 C9orf172C9J069 976 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 IGF2BP3O00425 579 aaKnown RBP eCLIP6.82□□□□□ -1.32
NUP98-208ENST00000461047 STRNO43815 780 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 XYLBO75191 536 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 ICAM1P05362 532 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 CYP2C8P10632 490 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 BRD2P25440 801 aaKnown RBP6.82□□□□□ -1.32
NUP98-208ENST00000461047 TARSP26639 723 aaKnown RBP6.82□□□□□ -1.32
NUP98-208ENST00000461047 CALML3P27482 149 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 GNA11P29992 359 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 HTRA3P83110 453 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 SCRN1Q12765 414 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 MOGSQ13724 837 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 KCTD2Q14681 263 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 SAFBQ15424 915 aaKnown RBP eCLIP6.82□□□□□ -1.32
NUP98-208ENST00000461047 GRIK4Q16099 956 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 CDC37Q16543 378 aaPredicted RBP6.82□□□□□ -1.32
NUP98-208ENST00000461047 FAM110CQ1W6H9 321 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 NOM1Q5C9Z4 860 aaKnown RBP6.82□□□□□ -1.32
NUP98-208ENST00000461047 KIAA1755Q5JYT7 1200 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 WDR78Q5VTH9 848 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 SNRNP48Q6IEG0 339 aaKnown RBP6.82□□□□□ -1.32
NUP98-208ENST00000461047 GALNT17Q6IS24 598 aa6.82□□□□□ -1.32
NUP98-208ENST00000461047 C16orf46Q6P387 395 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms