RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 CBX2Q14781 532 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-202ENST00000460925 SGO2Q562F6 1265 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 EPHA10Q5JZY3 1008 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 SUSD4Q5VX71 490 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 UBE3BQ7Z3V4 1068 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 NLRP10Q86W26 655 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 THNSL2Q86YJ6 484 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 FAM20CQ8IXL6 584 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 ZNF34Q8IZ26 560 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 ARMC10Q8N2F6 343 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 ARHGAP45Q92619 1136 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 ZNF622Q969S3 477 aaKnown RBP eCLIP6.04□□□□□ -1.444e-11■□□□□ 9.2
SF3A3-202ENST00000460925 ZNF830Q96NB3 372 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-202ENST00000460925 ISCA1Q9BUE6 129 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 TYW1Q9NV66 732 aaKnown RBP6.04□□□□□ -1.44
SF3A3-202ENST00000460925 AKT3Q9Y243 479 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 KIF13BQ9NQT8 1826 aa6.04□□□□□ -1.44
SF3A3-202ENST00000460925 POLRMTO00411 1230 aaKnown RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 DYNC1LI2O43237 492 aaPredicted RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 MMP10P09238 476 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 BMP3P12645 472 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 STAT3P40763 770 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 CCT4P50991 539 aaKnown RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 ZNF445P59923 1031 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 NEXNQ0ZGT2 675 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 GCKRQ14397 625 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 GPAT2Q6NUI2 795 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 NSMFQ6X4W1 530 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 C22orf34Q6ZV56 151 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 LINS1Q8NG48 757 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 CCDC140Q96MF4 163 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 USP44Q9H0E7 712 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 BICC1Q9H694 974 aaKnown RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 METTL14Q9HCE5 456 aaKnown RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 INTS7Q9NVH2 962 aaKnown RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 CWC25Q9NXE8 425 aaPredicted RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 CGGBP1Q9UFW8 167 aaPredicted RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 TRMT112Q9UI30 125 aaKnown RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 ZNF652Q9Y2D9 606 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 SUGT1Q9Y2Z0 365 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 LRRFIP2Q9Y608 721 aaKnown RBP6.03□□□□□ -1.44
SF3A3-202ENST00000460925 DLEC1Q9Y238 1755 aa6.03□□□□□ -1.44
SF3A3-202ENST00000460925 FAM95CA0A1B0GW59 222 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 GRM8O00222 908 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 PRODHO43272 600 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 TBX1O43435 398 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 SCG5P05408 212 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 UBTFL1P0CB47 393 aaPredicted RBP6.02□□□□□ -1.45
SF3A3-202ENST00000460925 GRIA2P42262 883 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 MAP4K2Q12851 820 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 PRR5LQ6MZQ0 368 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 FAM214BQ7L5A3 538 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 TXNRD3Q86VQ6 643 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 NBPF5PQ86XG9 351 aaPredicted RBP6.02□□□□□ -1.45
SF3A3-202ENST00000460925 GIMAP7Q8NHV1 300 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 SCARF2Q96GP6 870 aaPredicted RBP6.02□□□□□ -1.45
SF3A3-202ENST00000460925 KAZALD1Q96I82 304 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 MEGF10Q96KG7 1140 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 DUSP23Q9BVJ7 150 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 PRDM14Q9GZV8 571 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 CAAP1Q9H8G2 361 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 C9orf78Q9NZ63 289 aaPredicted RBP6.02□□□□□ -1.45
SF3A3-202ENST00000460925 LRP5O75197 1615 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 BRCA1P38398 1863 aaKnown RBP6.02□□□□□ -1.45
SF3A3-202ENST00000460925 UTRNP46939 3433 aa6.02□□□□□ -1.45
SF3A3-202ENST00000460925 PNMA6EA0A0J9YXQ4 647 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 GSG1L2A8MUP6 293 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 IRS4O14654 1257 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 NPHP1O15259 732 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 DLX3O60479 287 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 ALDH1L1O75891 902 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 SERPINB2P05120 415 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 PCCAP05165 728 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 C6orf222P0C671 652 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 POU3F3P20264 500 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 TM4SF1P30408 202 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 HOXC12P31275 282 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 KIR3DL1P43629 444 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 GFRA1P56159 465 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 GABREP78334 506 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 CDK5R2Q13319 367 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 HSP90AB3PQ58FF7 597 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 NOL9Q5SY16 702 aaKnown RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 SPTY2D1Q68D10 685 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 PAOXQ6QHF9 649 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 CLEC4GQ6UXB4 293 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 TOP6BLQ8N6T0 577 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 ANKRD44Q8N8A2 993 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 CNBD1Q8NA66 436 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 CCDC191Q8NCU4 936 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 GSTCDQ8NEC7 633 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 FLAD1Q8NFF5 587 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 KLHDC4Q8TBB5 520 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 CHAC2Q8WUX2 184 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 UTP4Q969X6 686 aaKnown RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 PPP1R14AQ96A00 147 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 CLUHP3Q96NS8 147 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 IER2Q9BTL4 223 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 UTP14AQ9BVJ6 771 aaKnown RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 LGR4Q9BXB1 951 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms