RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 CUL5Q93034 780 aa12.55□□□□□ -0.4
VAMP7-203ENST00000460621 ZNF689Q96CS4 500 aaPredicted RBP12.55□□□□□ -0.4
VAMP7-203ENST00000460621 IL17RAQ96F46 866 aa12.55□□□□□ -0.4
VAMP7-203ENST00000460621 TMEM87BQ96K49 555 aa12.55□□□□□ -0.4
VAMP7-203ENST00000460621 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
VAMP7-203ENST00000460621 FAM217BQ9NTX9 383 aaPredicted RBP12.55□□□□□ -0.4
VAMP7-203ENST00000460621 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
VAMP7-203ENST00000460621 BRPF3Q9ULD4 1205 aa12.55□□□□□ -0.4
VAMP7-203ENST00000460621 CDY2AQ9Y6F7 541 aa12.55□□□□□ -0.4
VAMP7-203ENST00000460621 KAT6AQ92794 2004 aa12.55□□□□□ -0.4
VAMP7-203ENST00000460621 NLRC5Q86WI3 1866 aa12.55□□□□□ -0.4
VAMP7-203ENST00000460621 CCDC69A6NI79 296 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 C5orf67F2Z3F1 127 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 GPR37L1O60883 481 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 DNAJB1P25685 340 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 CD52P31358 61 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 BMPR1AP36894 532 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 GNAQP50148 359 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 IGBP1P78318 339 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 EXOSC10Q01780 885 aaKnown RBP12.54□□□□□ -0.4
VAMP7-203ENST00000460621 ITGB3BPQ13352 177 aaPredicted RBP12.54□□□□□ -0.4
VAMP7-203ENST00000460621 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 GJD3Q8N144 294 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 APBB2Q92870 758 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 SAMD11Q96NU1 681 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 KCNH7Q9NS40 1196 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 TMEM260Q9NX78 707 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 SEC63Q9UGP8 760 aaKnown RBP12.54□□□□□ -0.4
VAMP7-203ENST00000460621 TUBE1Q9UJT0 475 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
VAMP7-203ENST00000460621 DGKIO75912 1065 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 GATMP50440 423 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 TMEM62Q0P6H9 643 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 MTMR1Q13613 665 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 PLCB4Q15147 1175 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 CTC1Q2NKJ3 1217 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 ADCK5Q3MIX3 580 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 TMEM31Q5JXX7 168 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 TAF2Q6P1X5 1199 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 SGMS1Q86VZ5 419 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 MICU3Q86XE3 530 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 TMTC2Q8N394 836 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 GIMAP8Q8ND71 665 aaPredicted RBP12.53□□□□□ -0.4
VAMP7-203ENST00000460621 GLG1Q92896 1179 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 CLP1Q92989 425 aaKnown RBP12.53□□□□□ -0.4
VAMP7-203ENST00000460621 PABPC5Q96DU9 382 aaKnown RBP12.53□□□□□ -0.4
VAMP7-203ENST00000460621 UIMC1Q96RL1 719 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 MXRA8Q9BRK3 442 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 FAM49AQ9H0Q0 323 aaPredicted RBP12.53□□□□□ -0.4
VAMP7-203ENST00000460621 TMX1Q9H3N1 280 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 SMARCAD1Q9H4L7 1026 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 ERAP1Q9NZ08 941 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 SLC12A7Q9Y666 1083 aa12.53□□□□□ -0.4
VAMP7-203ENST00000460621 LINC01565O15544 149 aa12.52□□□□□ -0.41
VAMP7-203ENST00000460621 CCNE2O96020 404 aa12.52□□□□□ -0.41
VAMP7-203ENST00000460621 CDC27P30260 824 aa12.52□□□□□ -0.41
VAMP7-203ENST00000460621 CTNNB1P35222 781 aa12.52□□□□□ -0.41
VAMP7-203ENST00000460621 MRPS6P82932 125 aaKnown RBP12.52□□□□□ -0.41
VAMP7-203ENST00000460621 HYAL1Q12794 435 aa12.52□□□□□ -0.41
VAMP7-203ENST00000460621 PTPROQ16827 1216 aa12.52□□□□□ -0.41
VAMP7-203ENST00000460621 NSUN3Q9H649 340 aaKnown RBP12.52□□□□□ -0.41
VAMP7-203ENST00000460621 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
VAMP7-203ENST00000460621 MRPL42Q9Y6G3 142 aaKnown RBP12.52□□□□□ -0.41
VAMP7-203ENST00000460621 MUC6Q6W4X9 2439 aa12.52□□□□□ -0.41
VAMP7-203ENST00000460621 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 STXBP3O00186 592 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 DHX15O43143 795 aaKnown RBP12.51□□□□□ -0.41
VAMP7-203ENST00000460621 MGEA5O60502 916 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 CSPG5O95196 566 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 ATG7O95352 703 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 ATP4AP20648 1035 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 CLK2P49760 499 aaKnown RBP12.51□□□□□ -0.41
VAMP7-203ENST00000460621 ACTR2P61160 394 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 ZP2Q05996 745 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 TIGD5Q53EQ6 642 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 TSHZ1Q6ZSZ6 1077 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 FAM122AQ96E09 287 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 CDHR1Q96JP9 859 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 AGO4Q9HCK5 861 aaKnown RBP12.51□□□□□ -0.41
VAMP7-203ENST00000460621 JPH1Q9HDC5 661 aaPredicted RBP12.51□□□□□ -0.41
VAMP7-203ENST00000460621 RIC8AQ9NPQ8 531 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
VAMP7-203ENST00000460621 CLDND1Q9NY35 253 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 SLC9A2Q9UBY0 812 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 V9GY48 417 aaPredicted RBP12.51□□□□□ -0.41
VAMP7-203ENST00000460621 ADGRA3Q8IWK6 1321 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 C5orf42Q9H799 3197 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 RALGAPA2Q2PPJ7 1873 aa12.51□□□□□ -0.41
VAMP7-203ENST00000460621 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
VAMP7-203ENST00000460621 IGKV6D-21A0A0A0MT36 114 aa12.5□□□□□ -0.41
VAMP7-203ENST00000460621 SPDYE3A6NKU9 549 aa12.5□□□□□ -0.41
VAMP7-203ENST00000460621 ZBTB42B2RXF5 422 aa12.5□□□□□ -0.41
VAMP7-203ENST00000460621 MEIS1O00470 390 aa12.5□□□□□ -0.41
VAMP7-203ENST00000460621 MAFGO15525 162 aa12.5□□□□□ -0.41
VAMP7-203ENST00000460621 EDIL3O43854 480 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms