RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 DNAI1Q9UI46 699 aa15.62■□□□□ 0.09
ERCC3-205ENST00000460485 ZNF112Q9UJU3 913 aa15.62■□□□□ 0.09
ERCC3-205ENST00000460485 CCPG1Q9ULG6 757 aa15.62■□□□□ 0.09
ERCC3-205ENST00000460485 CTDP1Q9Y5B0 961 aaPredicted RBP15.62■□□□□ 0.09
ERCC3-205ENST00000460485 MYPNQ86TC9 1320 aa15.62■□□□□ 0.09
ERCC3-205ENST00000460485 TRIOBPQ9H2D6 2365 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 MANSC4A6NHS7 340 aaPredicted RBP15.61■□□□□ 0.09
ERCC3-205ENST00000460485 TBCAO75347 108 aaKnown RBP15.61■□□□□ 0.09
ERCC3-205ENST00000460485 MED24O75448 989 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 PSMD10O75832 226 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 SLU7O95391 586 aaKnown RBP15.61■□□□□ 0.09
ERCC3-205ENST00000460485 EN2P19622 333 aaPredicted RBP15.61■□□□□ 0.09
ERCC3-205ENST00000460485 KRT9P35527 623 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 ZBED6P86452 979 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 TBC1D8BQ0IIM8 1120 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 BMT2Q1RMZ1 405 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 CCDC174Q6PII3 467 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 KCNK18Q7Z418 384 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 CATSPER3Q86XQ3 398 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 CCDC170Q8IYT3 715 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 SCYL3Q8IZE3 742 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 EHBP1Q8NDI1 1231 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 ZNF592Q92610 1267 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 TEKT3Q9BXF9 490 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 SEMA6BQ9H3T3 888 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 SLC38A10Q9HBR0 1119 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 OLFML3Q9NRN5 406 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 COL4A3BPQ9Y5P4 624 aa15.61■□□□□ 0.09
ERCC3-205ENST00000460485 RLFQ13129 1914 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 COL11A1P12107 1806 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-205ENST00000460485 C19orf81C9J6K1 198 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 MEIS1O00470 390 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 DLL1O00548 723 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 EIF3DO15371 548 aaKnown RBP eCLIP15.6■□□□□ 0.09
ERCC3-205ENST00000460485 KIF5CO60282 957 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 GAS7O60861 476 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 ZBED4O75132 1171 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 IPO7O95373 1038 aaKnown RBP15.6■□□□□ 0.09
ERCC3-205ENST00000460485 SSBP05455 408 aaKnown RBP eCLIP15.6■□□□□ 0.09
ERCC3-205ENST00000460485 TRIM21P19474 475 aaKnown RBP15.6■□□□□ 0.09
ERCC3-205ENST00000460485 CYLC1P35663 651 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-205ENST00000460485 KRT83P78385 493 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 EPHA7Q15375 998 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 MEA1Q16626 185 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 VWA3BQ502W6 1294 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 KIAA1755Q5JYT7 1200 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 PRAMEF18Q5VWM3 479 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 LRRC55Q6ZSA7 311 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 MIGA2Q7L4E1 593 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 IFNL1Q8IU54 200 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 OTUD5Q96G74 571 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 EIF2AK1Q9BQI3 630 aaKnown RBP15.6■□□□□ 0.09
ERCC3-205ENST00000460485 TTYH3Q9C0H2 523 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 ODF2LQ9ULJ1 636 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 PPP1R9AQ9ULJ8 1098 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 ADGRG1Q9Y653 693 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 CEP290O15078 2479 aa15.6■□□□□ 0.09
ERCC3-205ENST00000460485 UNCXA6NJT0 531 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 E9PMD0 336 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 PES1O00541 588 aaKnown RBP15.59■□□□□ 0.09
ERCC3-205ENST00000460485 SPATA31C1P0DKV0 1188 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 HOXA13P31271 388 aaPredicted RBP15.59■□□□□ 0.09
ERCC3-205ENST00000460485 HNRNPH3P31942 346 aaKnown RBP15.59■□□□□ 0.09
ERCC3-205ENST00000460485 MKRN3Q13064 507 aaKnown RBP15.59■□□□□ 0.09
ERCC3-205ENST00000460485 ALCAMQ13740 583 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 ECM1Q16610 540 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 NFIL3Q16649 462 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 TKFCQ3LXA3 575 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 HERC4Q5GLZ8 1057 aaPredicted RBP15.59■□□□□ 0.09
ERCC3-205ENST00000460485 NOL9Q5SY16 702 aaKnown RBP15.59■□□□□ 0.09
ERCC3-205ENST00000460485 PCNX4Q63HM2 1172 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 TRIM65Q6PJ69 517 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 SYT10Q6XYQ8 523 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 NACC1Q96RE7 527 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 P2RX7Q99572 595 aaKnown RBP15.59■□□□□ 0.09
ERCC3-205ENST00000460485 MXRA8Q9BRK3 442 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 TIPINQ9BVW5 301 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 TMEM106CQ9BVX2 250 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 NDST4Q9H3R1 872 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 PICK1Q9NRD5 415 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 TRAF3IP3Q9Y228 551 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 DAAM1Q9Y4D1 1078 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 PCDHA2Q9Y5H9 948 aa15.59■□□□□ 0.09
ERCC3-205ENST00000460485 B4DLN1 442 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 PDXKO00764 312 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 SLC16A3O15427 465 aaKnown RBP15.58■□□□□ 0.08
ERCC3-205ENST00000460485 CALUO43852 315 aaPredicted RBP15.58■□□□□ 0.08
ERCC3-205ENST00000460485 ZBTB48P10074 688 aaPredicted RBP15.58■□□□□ 0.08
ERCC3-205ENST00000460485 RPL13P26373 211 aaKnown RBP15.58■□□□□ 0.08
ERCC3-205ENST00000460485 SNAP25P60880 206 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 ARHGAP29Q52LW3 1261 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 MIIPQ5JXC2 388 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 POTEGQ6S5H5 508 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 POTEEQ6S8J3 1075 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 SLC17A8Q8NDX2 589 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 RDM1Q8NG50 284 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 HSD17B14Q9BPX1 270 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 ZNF577Q9BSK1 485 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.08
ERCC3-205ENST00000460485 TBC1D22BQ9NU19 505 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms