RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 SPC25Q9HBM1 224 aa11.53□□□□□ -0.56
GARNL3-211ENST00000460176 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
GARNL3-211ENST00000460176 PCDHA10Q9Y5I2 948 aa11.53□□□□□ -0.56
GARNL3-211ENST00000460176 EMSYQ7Z589 1322 aa11.53□□□□□ -0.56
GARNL3-211ENST00000460176 PPFIA4O75335 1185 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 LGR5O75473 907 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 LGALS2P05162 132 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 ZNF286BP0CG31 522 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 LONP1P36776 959 aaKnown RBP11.52□□□□□ -0.57
GARNL3-211ENST00000460176 PURAQ00577 322 aaKnown RBP11.52□□□□□ -0.57
GARNL3-211ENST00000460176 PDIA5Q14554 519 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 EPHA7Q15375 998 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 KCNA10Q16322 511 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 DGKDQ16760 1214 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 GNASQ5JWF2 1037 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 MIS18BP1Q6P0N0 1132 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 CCDC60Q8IWA6 550 aaPredicted RBP11.52□□□□□ -0.57
GARNL3-211ENST00000460176 KRI1Q8N9T8 703 aaKnown RBP11.52□□□□□ -0.57
GARNL3-211ENST00000460176 ARRDC4Q8NCT1 418 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 ABHD8Q96I13 439 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 SPATA32Q96LK8 384 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 CLIC6Q96NY7 704 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 C16orf70Q9BSU1 422 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 SCAND2PQ9GZW5 306 aaPredicted RBP11.52□□□□□ -0.57
GARNL3-211ENST00000460176 CSRNP2Q9H175 543 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 GDPD2Q9HCC8 539 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 DISC1Q9NRI5 854 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 LRWD1Q9UFC0 647 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 IGSF9BQ9UPX0 1349 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 SCN10AQ9Y5Y9 1956 aa11.52□□□□□ -0.57
GARNL3-211ENST00000460176 MOXD2PA6NHM9 499 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 PP2D1A8MPX8 630 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 DNM1LO00429 736 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 KPNA6O60684 536 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 F2P00734 622 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 TFRCP02786 760 aaKnown RBP11.51□□□□□ -0.57
GARNL3-211ENST00000460176 ASGR1P07306 291 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 PSAPP07602 524 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 MYL3P08590 195 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 ACLYP53396 1101 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 UGCGQ16739 394 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 BRDTQ58F21 947 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-211ENST00000460176 AXDND1Q5T1B0 1012 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-211ENST00000460176 UTP14CQ5TAP6 766 aaKnown RBP11.51□□□□□ -0.57
GARNL3-211ENST00000460176 SWSAP1Q6NVH7 229 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 CXCL17Q6UXB2 119 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 CLEC17AQ6ZS10 378 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 TRIM50Q86XT4 487 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 PCSK9Q8NBP7 692 aaKnown RBP11.51□□□□□ -0.57
GARNL3-211ENST00000460176 AFAP1L1Q8TED9 768 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 KAT2BQ92831 832 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 AK8Q96MA6 479 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 HSD17B14Q9BPX1 270 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 EIF2AK1Q9BQI3 630 aaKnown RBP11.51□□□□□ -0.57
GARNL3-211ENST00000460176 TSEN34Q9BSV6 310 aaKnown RBP11.51□□□□□ -0.57
GARNL3-211ENST00000460176 MMTAG2Q9BU76 263 aaKnown RBP11.51□□□□□ -0.57
GARNL3-211ENST00000460176 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 RAB34Q9BZG1 259 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 GABBR1Q9UBS5 961 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 PCDHA7Q9UN72 937 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 PHF24Q9UPV7 400 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 SAMM50Q9Y512 469 aa11.51□□□□□ -0.57
GARNL3-211ENST00000460176 LOXHD1Q8IVV2 1947 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 KBTBD13C9JR72 458 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 BACH1O14867 736 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 ZNF862O60290 1169 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 ZEB2O60315 1214 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 CUTAO60888 179 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 MED24O75448 989 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 SLITRK3O94933 977 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 P4HBP07237 508 aaKnown RBP11.5□□□□□ -0.57
GARNL3-211ENST00000460176 SPATA31C1P0DKV0 1188 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 CAPN2P17655 700 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 ATP4AP20648 1035 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 CDC25AP30304 524 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 ME1P48163 572 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 STAT5BP51692 787 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 FAM160B1Q5W0V3 765 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 BANK1Q8NDB2 785 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 NEK9Q8TD19 979 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 DYDC2Q96IM9 177 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-211ENST00000460176 MFRPQ9BY79 579 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 SMARCAD1Q9H4L7 1026 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 ZNF302Q9NR11 478 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 RGL1Q9NZL6 768 aa11.5□□□□□ -0.57
GARNL3-211ENST00000460176 WRAP73Q9P2S5 460 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-211ENST00000460176 HAS3O00219 553 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 STBD1O95210 358 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 COL6A1P12109 1028 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 RPA1P27694 616 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 QARSP47897 775 aaKnown RBP11.49□□□□□ -0.57
GARNL3-211ENST00000460176 PSMC5P62195 406 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 PDXDC2PQ6P474 469 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 SHC4Q6S5L8 630 aa11.49□□□□□ -0.57
GARNL3-211ENST00000460176 USP49Q70CQ1 688 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms