RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GDPD5Q8WTR4 605 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 AZI2Q9H6S1 392 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 SNX14Q9Y5W7 946 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 RALGAPA2Q2PPJ7 1873 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 NLRC5Q86WI3 1866 aa26■■□□□ 1.75
PTPN4-207ENST00000460162 ESYT2A0FGR8 921 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 REC8O95072 547 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 SCG2P13521 617 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 CPA1P15085 419 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 APOBRQ0VD83 1088 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 RUFY4Q6ZNE9 571 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 FBXL16Q8N461 479 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 CYP2W1Q8TAV3 490 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 ADAMTS19Q8TE59 1207 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 BRF1Q92994 677 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 PCYT2Q99447 389 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 OSBPL7Q9BZF2 842 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 MTUS1Q9ULD2 1270 aa25.99■■□□□ 1.75
PTPN4-207ENST00000460162 RBAK-RBAKDNI3L0D1 243 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 TNFRSF10AO00220 468 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 ADD1P35611 737 aaKnown RBP25.98■■□□□ 1.75
PTPN4-207ENST00000460162 ACTR2P61160 394 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 MGAT3Q09327 533 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 NIPA1Q7RTP0 329 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 TNPO1Q92973 898 aaKnown RBP25.98■■□□□ 1.75
PTPN4-207ENST00000460162 TOP1MTQ969P6 601 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 SUGCTQ9HAC7 445 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 AGO4Q9HCK5 861 aaKnown RBP25.98■■□□□ 1.75
PTPN4-207ENST00000460162 TMEM260Q9NX78 707 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 COG5Q9UP83 839 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 NCOR1O75376 2440 aa25.98■■□□□ 1.75
PTPN4-207ENST00000460162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.97■■□□□ 1.75
PTPN4-207ENST00000460162 RRN3P2A6NIE6 340 aa25.97■■□□□ 1.75
PTPN4-207ENST00000460162 MEIS1O00470 390 aa25.97■■□□□ 1.75
PTPN4-207ENST00000460162 CHRNA1P02708 482 aa25.97■■□□□ 1.75
PTPN4-207ENST00000460162 ARP10275 920 aa25.97■■□□□ 1.75
PTPN4-207ENST00000460162 ITGB3BPQ13352 177 aaPredicted RBP25.97■■□□□ 1.75
PTPN4-207ENST00000460162 MARCH8Q5T0T0 291 aa25.97■■□□□ 1.75
PTPN4-207ENST00000460162 CCDC12Q8WUD4 166 aaPredicted RBP25.97■■□□□ 1.75
PTPN4-207ENST00000460162 AGXT2Q9BYV1 514 aa25.97■■□□□ 1.75
PTPN4-207ENST00000460162 GHRP10912 638 aa25.96■■□□□ 1.75
PTPN4-207ENST00000460162 RPS6KB1P23443 525 aa25.96■■□□□ 1.75
PTPN4-207ENST00000460162 MCTP2Q6DN12 878 aa25.96■■□□□ 1.75
PTPN4-207ENST00000460162 PLPPR4Q7Z2D5 763 aa25.96■■□□□ 1.75
PTPN4-207ENST00000460162 SAMD11Q96NU1 681 aa25.96■■□□□ 1.75
PTPN4-207ENST00000460162 YME1L1Q96TA2 773 aa25.96■■□□□ 1.75
PTPN4-207ENST00000460162 ZMYND12Q9H0C1 365 aa25.96■■□□□ 1.75
PTPN4-207ENST00000460162 TRPC6Q9Y210 931 aa25.96■■□□□ 1.75
PTPN4-207ENST00000460162 INSRRP14616 1297 aa25.95■■□□□ 1.74
PTPN4-207ENST00000460162 ZNF76P36508 570 aa25.95■■□□□ 1.74
PTPN4-207ENST00000460162 SLC26A2P50443 739 aa25.95■■□□□ 1.74
PTPN4-207ENST00000460162 IGBP1P78318 339 aa25.95■■□□□ 1.74
PTPN4-207ENST00000460162 TFF2Q03403 129 aa25.95■■□□□ 1.74
PTPN4-207ENST00000460162 FBXO22Q8NEZ5 403 aa25.95■■□□□ 1.74
PTPN4-207ENST00000460162 DNAJB3Q8WWF6 145 aa25.95■■□□□ 1.74
PTPN4-207ENST00000460162 CRYGNQ8WXF5 182 aa25.95■■□□□ 1.74
PTPN4-207ENST00000460162 UHRF1Q96T88 793 aaPredicted RBP25.95■■□□□ 1.74
PTPN4-207ENST00000460162 PSMA5P28066 241 aa25.94■■□□□ 1.74
PTPN4-207ENST00000460162 STAT5BP51692 787 aa25.94■■□□□ 1.74
PTPN4-207ENST00000460162 MRPS6P82932 125 aaKnown RBP25.94■■□□□ 1.74
PTPN4-207ENST00000460162 LPIN1Q14693 890 aa25.94■■□□□ 1.74
PTPN4-207ENST00000460162 REXO1Q8N1G1 1221 aaKnown RBP25.94■■□□□ 1.74
PTPN4-207ENST00000460162 C17orf80Q9BSJ5 609 aa25.94■■□□□ 1.74
PTPN4-207ENST00000460162 C6orf50Q9HD87 102 aa25.94■■□□□ 1.74
PTPN4-207ENST00000460162 PRPF3O43395 683 aaKnown RBP25.93■■□□□ 1.74
PTPN4-207ENST00000460162 EPB41L2O43491 1005 aaKnown RBP25.93■■□□□ 1.74
PTPN4-207ENST00000460162 ATG7O95352 703 aa25.93■■□□□ 1.74
PTPN4-207ENST00000460162 CYP3A4P08684 503 aa25.93■■□□□ 1.74
PTPN4-207ENST00000460162 SETQ01105 290 aaPredicted RBP25.93■■□□□ 1.74
PTPN4-207ENST00000460162 PLCB4Q15147 1175 aa25.93■■□□□ 1.74
PTPN4-207ENST00000460162 FBXO47Q5MNV8 452 aa25.93■■□□□ 1.74
PTPN4-207ENST00000460162 JAKMIP3Q5VZ66 844 aa25.93■■□□□ 1.74
PTPN4-207ENST00000460162 TSHZ1Q6ZSZ6 1077 aa25.93■■□□□ 1.74
PTPN4-207ENST00000460162 CDY2AQ9Y6F7 541 aa25.93■■□□□ 1.74
PTPN4-207ENST00000460162 BDP1A6H8Y1 2624 aa25.92■■□□□ 1.74
PTPN4-207ENST00000460162 IGLV3-22A0A075B6J6 115 aa25.92■■□□□ 1.74
PTPN4-207ENST00000460162 FAM86B1E9PN63 330 aa25.92■■□□□ 1.74
PTPN4-207ENST00000460162 UPP2O95045 317 aa25.92■■□□□ 1.74
PTPN4-207ENST00000460162 FAM86B2P0C5J1 330 aa25.92■■□□□ 1.74
PTPN4-207ENST00000460162 PKN1Q16512 942 aa25.92■■□□□ 1.74
PTPN4-207ENST00000460162 PLA2G4DQ86XP0 818 aa25.92■■□□□ 1.74
PTPN4-207ENST00000460162 HLA-CQ95604 372 aa25.92■■□□□ 1.74
PTPN4-207ENST00000460162 RNF26Q9BY78 433 aaPredicted RBP25.92■■□□□ 1.74
PTPN4-207ENST00000460162 TCF20Q9UGU0 1960 aaKnown RBP25.91■■□□□ 1.74
PTPN4-207ENST00000460162 LOXHD1Q8IVV2 1947 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 IGKV6D-21A0A0A0MT36 114 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 CCNE2O96020 404 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 BMP1P13497 986 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 GNA11P29992 359 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 AKAP17AQ02040 695 aaKnown RBP25.91■■□□□ 1.74
PTPN4-207ENST00000460162 IER5Q5VY09 327 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 CCDC148Q8NFR7 591 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 FAM49AQ9H0Q0 323 aaPredicted RBP25.91■■□□□ 1.74
PTPN4-207ENST00000460162 PCDHA2Q9Y5H9 948 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 SQORQ9Y6N5 450 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 BRWD1Q9NSI6 2320 aa25.91■■□□□ 1.74
PTPN4-207ENST00000460162 POTEB3A0JP26 581 aa25.9■■□□□ 1.74
PTPN4-207ENST00000460162 M0QZ92 97 aa25.9■■□□□ 1.74
PTPN4-207ENST00000460162 KCNQ1P51787 676 aa25.9■■□□□ 1.74
PTPN4-207ENST00000460162 EVCP57679 992 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms