RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 HCFC2Q9Y5Z7 792 aa15.84■□□□□ 0.13
PCOLCE-202ENST00000460002 SETXQ7Z333 2677 aaKnown RBP15.83■□□□□ 0.13
PCOLCE-202ENST00000460002 ZFYVE26Q68DK2 2539 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 IPO8O15397 1037 aaKnown RBP15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 NARSO43776 548 aaKnown RBP15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 EOMESO95936 686 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 DCNP07585 359 aaKnown RBP15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 IFIT2P09913 472 aaKnown RBP15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 GNAT1P11488 350 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 ATP5JP18859 108 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 EIF2AK2P19525 551 aaKnown RBP15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 TGM1P22735 817 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 NOVP48745 357 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 SP2Q02086 613 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 SPECC1Q5M775 1068 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 PPP4R3BQ5MIZ7 849 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 ZSCAN25Q6NSZ9 544 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 RUFY4Q6ZNE9 571 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 C1orf210Q8IVY1 113 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 CLASRPQ8N2M8 674 aaKnown RBP15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 TCF25Q9BQ70 676 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 BCL11AQ9H165 835 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 AAASQ9NRG9 546 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 DLGAP2Q9P1A6 1054 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 MYH7BA7E2Y1 1941 aa15.83■□□□□ 0.12
PCOLCE-202ENST00000460002 POTEMA6NI47 508 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 NR3C2P08235 984 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 ARHGAP4P98171 946 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 SPOUT1Q5T280 376 aaKnown RBP15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 KANK3Q6NY19 840 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 CEP85Q6P2H3 762 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 POTEGQ6S5H5 508 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 TSHZ1Q6ZSZ6 1077 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 THNSL1Q8IYQ7 743 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 MAML2Q8IZL2 1156 aaPredicted RBP15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 C12orf76Q8N812 135 aaPredicted RBP15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 FEZF2Q8TBJ5 459 aa15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 FRAT1Q92837 279 aaPredicted RBP15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 DBR1Q9UK59 544 aaKnown RBP15.82■□□□□ 0.12
PCOLCE-202ENST00000460002 TSPY2A6NKD2 308 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 CFHP08603 1231 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 STAG3L1P0CL83 205 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 MYH7P12883 1935 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 UBA1P22314 1058 aaKnown RBP15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 CD52P31358 61 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 RARS2Q5T160 578 aaKnown RBP15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 ARHGEF16Q5VV41 709 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 KIAA1841Q6NSI8 718 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 IFNL3Q8IZI9 196 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 COLGALT1Q8NBJ5 622 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 BCAS3Q9H6U6 928 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 TBC1D17Q9HA65 648 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 KCNK12Q9HB15 430 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 ENTPD7Q9NQZ7 604 aa15.81■□□□□ 0.12
PCOLCE-202ENST00000460002 GPAA1O43292 621 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 APPP05067 770 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 SCG2P13521 617 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 TRIM50Q86XT4 487 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 MRPS27Q92552 414 aaKnown RBP15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 PARD6AQ9NPB6 346 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 PXMP2Q9NR77 195 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 WNT16Q9UBV4 365 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 ANGPTL2Q9UKU9 493 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 USP18Q9UMW8 372 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 LZTS1Q9Y250 596 aa15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
PCOLCE-202ENST00000460002 SPEGQ15772 3267 aa15.79■□□□□ 0.12
PCOLCE-202ENST00000460002 RFX1P22670 979 aa15.79■□□□□ 0.12
PCOLCE-202ENST00000460002 PPARAQ07869 468 aa15.79■□□□□ 0.12
PCOLCE-202ENST00000460002 ATAT1Q5SQI0 421 aa15.79■□□□□ 0.12
PCOLCE-202ENST00000460002 GPKOWQ92917 476 aaPredicted RBP eCLIP15.79■□□□□ 0.12
PCOLCE-202ENST00000460002 MLXIPQ9HAP2 919 aa15.79■□□□□ 0.12
PCOLCE-202ENST00000460002 NGRNQ9NPE2 291 aaKnown RBP15.79■□□□□ 0.12
PCOLCE-202ENST00000460002 CDY2AQ9Y6F7 541 aa15.79■□□□□ 0.12
PCOLCE-202ENST00000460002 CCDC171Q6TFL3 1326 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 SPTLC1O15269 473 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 GLULP15104 373 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 IBSPP21815 317 aaPredicted RBP15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 PLCB3Q01970 1234 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 XRRA1Q6P2D8 792 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 APPBP2Q92624 585 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 FTHL17Q9BXU8 183 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 MAF1Q9H063 256 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 TYW1Q9NV66 732 aaKnown RBP15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 CA14Q9ULX7 337 aa15.78■□□□□ 0.12
PCOLCE-202ENST00000460002 TBKBP1A7MCY6 615 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 SOBPA7XYQ1 873 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 PATL2C9JE40 543 aaKnown RBP15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 M0R2C6 588 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 SLC3A2P08195 630 aaKnown RBP15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 PDHBP11177 359 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 GNAT2P19087 354 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 HSP90AB4PQ58FF6 505 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 TAF2Q6P1X5 1199 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 KCNV1Q6PIU1 500 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 DNAJB3Q8WWF6 145 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 ACSF2Q96CM8 615 aaPredicted RBP15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 KIF1BPQ96EK5 621 aa15.77■□□□□ 0.12
PCOLCE-202ENST00000460002 TMEM47Q9BQJ4 181 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms