RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 TAF2Q6P1X5 1199 aa23.79■■□□□ 1.4
SRM-202ENST00000459997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.79■■□□□ 1.4
SRM-202ENST00000459997 PLA2G4DQ86XP0 818 aa23.79■■□□□ 1.4
SRM-202ENST00000459997 CRYGNQ8WXF5 182 aa23.79■■□□□ 1.4
SRM-202ENST00000459997 SEPT8Q92599 483 aa23.79■■□□□ 1.4
SRM-202ENST00000459997 OSBPL7Q9BZF2 842 aa23.79■■□□□ 1.4
SRM-202ENST00000459997 TM6SF1Q9BZW5 370 aa23.79■■□□□ 1.4
SRM-202ENST00000459997 MICAL3Q7RTP6 2002 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 RFXAPO00287 272 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 CYP3A4P08684 503 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 IGBP1P78318 339 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 FAM26DQ5JW98 314 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 FAM117BQ6P1L5 589 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 CCDC148Q8NFR7 591 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 ARNTL2Q8WYA1 636 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 RAD9AQ99638 391 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 TRPC6Q9Y210 931 aa23.78■■□□□ 1.4
SRM-202ENST00000459997 MYO9BQ13459 2157 aa23.77■■□□□ 1.4
SRM-202ENST00000459997 IGLV3-22A0A075B6J6 115 aa23.77■■□□□ 1.4
SRM-202ENST00000459997 MBLAC1A4D2B0 266 aaPredicted RBP23.77■■□□□ 1.4
SRM-202ENST00000459997 DDX39AO00148 427 aaKnown RBP23.77■■□□□ 1.4
SRM-202ENST00000459997 AMHP03971 560 aa23.77■■□□□ 1.4
SRM-202ENST00000459997 MKRN4PQ13434 485 aaPredicted RBP23.77■■□□□ 1.4
SRM-202ENST00000459997 MARCH8Q5T0T0 291 aa23.77■■□□□ 1.4
SRM-202ENST00000459997 RSPH3Q86UC2 560 aa23.77■■□□□ 1.4
SRM-202ENST00000459997 BICD2Q8TD16 824 aa23.77■■□□□ 1.4
SRM-202ENST00000459997 RASGRP4Q8TDF6 673 aa23.77■■□□□ 1.4
SRM-202ENST00000459997 LARP6Q9BRS8 491 aaKnown RBP23.77■■□□□ 1.4
SRM-202ENST00000459997 COL25A1Q9BXS0 654 aaPredicted RBP23.77■■□□□ 1.4
SRM-202ENST00000459997 VPS54Q9P1Q0 977 aa23.77■■□□□ 1.4
SRM-202ENST00000459997 EPOPA6NHQ4 379 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 CHRNA1P02708 482 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 INSRRP14616 1297 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 STAT5BP51692 787 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 PLPPR4Q7Z2D5 763 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 SPRED2Q7Z698 418 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 RPAINQ86UA6 219 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 TRIM22Q8IYM9 498 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 MYOCDQ8IZQ8 938 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 MICALL1Q8N3F8 863 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 ZNF274Q96GC6 653 aaPredicted RBP23.76■■□□□ 1.39
SRM-202ENST00000459997 UIMC1Q96RL1 719 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 PRDM6Q9NQX0 595 aa23.76■■□□□ 1.39
SRM-202ENST00000459997 SIP14410 1827 aa23.75■■□□□ 1.39
SRM-202ENST00000459997 RRN3P2A6NIE6 340 aa23.75■■□□□ 1.39
SRM-202ENST00000459997 IPO5O00410 1097 aaKnown RBP23.75■■□□□ 1.39
SRM-202ENST00000459997 ATG7O95352 703 aa23.75■■□□□ 1.39
SRM-202ENST00000459997 CCNE2O96020 404 aa23.75■■□□□ 1.39
SRM-202ENST00000459997 PLCB4Q15147 1175 aa23.75■■□□□ 1.39
SRM-202ENST00000459997 DNAJB3Q8WWF6 145 aa23.75■■□□□ 1.39
SRM-202ENST00000459997 TNPO1Q92973 898 aaKnown RBP23.75■■□□□ 1.39
SRM-202ENST00000459997 ZBTB10Q96DT7 871 aa23.75■■□□□ 1.39
SRM-202ENST00000459997 IFIH1Q9BYX4 1025 aaKnown RBP23.75■■□□□ 1.39
SRM-202ENST00000459997 PDRG1Q9NUG6 133 aa23.75■■□□□ 1.39
SRM-202ENST00000459997 COL4A4P53420 1690 aaPredicted RBP23.74■■□□□ 1.39
SRM-202ENST00000459997 CPLX1O14810 134 aa23.74■■□□□ 1.39
SRM-202ENST00000459997 SETQ01105 290 aaPredicted RBP23.74■■□□□ 1.39
SRM-202ENST00000459997 SSRP1Q08945 709 aaKnown RBP23.74■■□□□ 1.39
SRM-202ENST00000459997 STK3Q13188 491 aa23.74■■□□□ 1.39
SRM-202ENST00000459997 APBB2Q92870 758 aa23.74■■□□□ 1.39
SRM-202ENST00000459997 ZNF577Q9BSK1 485 aa23.74■■□□□ 1.39
SRM-202ENST00000459997 SH3GLB2Q9NR46 395 aa23.74■■□□□ 1.39
SRM-202ENST00000459997 POTEB3A0JP26 581 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 BACH1O14867 736 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 DHX15O43143 795 aaKnown RBP23.73■■□□□ 1.39
SRM-202ENST00000459997 GTPBP6O43824 516 aaPredicted RBP23.73■■□□□ 1.39
SRM-202ENST00000459997 GHRP10912 638 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 MGAT3Q09327 533 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 PRR16Q569H4 304 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 POTEBQ6S5H4 581 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 ABHD15Q6UXT9 468 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 TRAPPC12Q8WVT3 735 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 FAM49AQ9H0Q0 323 aaPredicted RBP23.73■■□□□ 1.39
SRM-202ENST00000459997 INSL6Q9Y581 213 aa23.73■■□□□ 1.39
SRM-202ENST00000459997 CUL9Q8IWT3 2517 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 IGKV6D-21A0A0A0MT36 114 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 SLC26A2P50443 739 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 NLRP5P59047 1200 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 FAM160B1Q5W0V3 765 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 THEGQ9P2T0 379 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 MTUS1Q9ULD2 1270 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 MTCH2Q9Y6C9 303 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 CDY2AQ9Y6F7 541 aa23.72■■□□□ 1.39
SRM-202ENST00000459997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.71■■□□□ 1.39
SRM-202ENST00000459997 LINC01553A4QN01 128 aa23.71■■□□□ 1.39
SRM-202ENST00000459997 RPLP2P05387 115 aaKnown RBP23.71■■□□□ 1.39
SRM-202ENST00000459997 POU3F3P20264 500 aaPredicted RBP23.71■■□□□ 1.39
SRM-202ENST00000459997 MRPS6P82932 125 aaKnown RBP23.71■■□□□ 1.39
SRM-202ENST00000459997 LPIN1Q14693 890 aa23.71■■□□□ 1.39
SRM-202ENST00000459997 MIS18BP1Q6P0N0 1132 aa23.71■■□□□ 1.39
SRM-202ENST00000459997 CPLX2Q6PUV4 134 aaKnown RBP23.71■■□□□ 1.39
SRM-202ENST00000459997 CCDC60Q8IWA6 550 aaPredicted RBP23.71■■□□□ 1.39
SRM-202ENST00000459997 TBC1D22BQ9NU19 505 aa23.71■■□□□ 1.39
SRM-202ENST00000459997 REV3LO60673 3130 aa23.71■■□□□ 1.39
SRM-202ENST00000459997 UPP2O95045 317 aa23.7■■□□□ 1.38
SRM-202ENST00000459997 DEXIO95424 95 aa23.7■■□□□ 1.38
SRM-202ENST00000459997 CIITAP33076 1130 aa23.7■■□□□ 1.38
SRM-202ENST00000459997 HTRA4P83105 476 aaPredicted RBP23.7■■□□□ 1.38
SRM-202ENST00000459997 GRB10Q13322 594 aa23.7■■□□□ 1.38
SRM-202ENST00000459997 KRT40Q6A162 431 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms