RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CTAGE1Q96RT6 745 aa14.46□□□□□ -0.09
COL18A1-206ENST00000459895 AZI2Q9H6S1 392 aa14.46□□□□□ -0.09
COL18A1-206ENST00000459895 PRDM5Q9NQX1 630 aaPredicted RBP14.46□□□□□ -0.09
COL18A1-206ENST00000459895 ZNF302Q9NR11 478 aa14.46□□□□□ -0.09
COL18A1-206ENST00000459895 DISC1Q9NRI5 854 aa14.46□□□□□ -0.09
COL18A1-206ENST00000459895 ERAP1Q9NZ08 941 aa14.46□□□□□ -0.09
COL18A1-206ENST00000459895 HDAC6Q9UBN7 1215 aa14.46□□□□□ -0.09
COL18A1-206ENST00000459895 GTF2IRD1Q9UHL9 959 aa14.46□□□□□ -0.09
COL18A1-206ENST00000459895 LOXHD1Q8IVV2 1947 aa14.46□□□□□ -0.09
COL18A1-206ENST00000459895 MARCH6O60337 910 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 CD4P01730 458 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 PSAPP07602 524 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 CLTBP09497 229 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 SYN1P17600 705 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 TXKP42681 527 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 ATP2C1P98194 919 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-206ENST00000459895 PRKCEQ02156 737 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 FAAP100Q0VG06 881 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 SCN5AQ14524 2016 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 PLCB4Q15147 1175 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 FAM160B1Q5W0V3 765 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 SH3RF1Q7Z6J0 888 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 C7orf31Q8N865 590 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 C4orf32Q8N8J7 132 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 BANK1Q8NDB2 785 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 RDM1Q8NG50 284 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 LMBR1Q8WVP7 490 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 DPF3Q92784 378 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 TRPV6Q9H1D0 765 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 SMARCAD1Q9H4L7 1026 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 TTC12Q9H892 705 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-206ENST00000459895 GABBR1Q9UBS5 961 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 TBX21Q9UL17 535 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 ZMYND8Q9ULU4 1186 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-206ENST00000459895 TRPC6Q9Y210 931 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 PCDHA10Q9Y5I2 948 aa14.45□□□□□ -0.1
COL18A1-206ENST00000459895 ZNF862O60290 1169 aa14.44□□□□□ -0.1
COL18A1-206ENST00000459895 F13A1P00488 732 aa14.44□□□□□ -0.1
COL18A1-206ENST00000459895 ZSCAN22P10073 491 aaPredicted RBP14.44□□□□□ -0.1
COL18A1-206ENST00000459895 STAT5BP51692 787 aa14.44□□□□□ -0.1
COL18A1-206ENST00000459895 PPFIA1Q13136 1202 aa14.44□□□□□ -0.1
COL18A1-206ENST00000459895 PTGDRQ13258 359 aa14.44□□□□□ -0.1
COL18A1-206ENST00000459895 SWSAP1Q6NVH7 229 aa14.44□□□□□ -0.1
COL18A1-206ENST00000459895 PDXDC2PQ6P474 469 aa14.44□□□□□ -0.1
COL18A1-206ENST00000459895 RNPEPQ9H4A4 650 aa14.44□□□□□ -0.1
COL18A1-206ENST00000459895 WRAP73Q9P2S5 460 aaPredicted RBP14.44□□□□□ -0.1
COL18A1-206ENST00000459895 UMODL1Q5DID0 1318 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 DCDC2CA8MYV0 355 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 TLR3O15455 904 aaKnown RBP14.43□□□□□ -0.1
COL18A1-206ENST00000459895 BAG4O95429 457 aaKnown RBP14.43□□□□□ -0.1
COL18A1-206ENST00000459895 CYP2C9P11712 490 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 ATP4AP20648 1035 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 ANP32AP39687 249 aaKnown RBP14.43□□□□□ -0.1
COL18A1-206ENST00000459895 ZNF200P98182 395 aaPredicted RBP14.43□□□□□ -0.1
COL18A1-206ENST00000459895 PTPN11Q06124 597 aaPredicted RBP14.43□□□□□ -0.1
COL18A1-206ENST00000459895 GRIK4Q16099 956 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 ATP8B4Q8TF62 1192 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 TRAPPC12Q8WVT3 735 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 DHX38Q92620 1227 aaKnown RBP14.43□□□□□ -0.1
COL18A1-206ENST00000459895 WNT8BQ93098 351 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 ZBTB10Q96DT7 871 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 TOX2Q96NM4 488 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 LXNQ9BS40 222 aa14.43□□□□□ -0.1
COL18A1-206ENST00000459895 MAFBQ9Y5Q3 323 aaPredicted RBP14.43□□□□□ -0.1
COL18A1-206ENST00000459895 KAT6AQ92794 2004 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 PDE4DIPQ5VU43 2346 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 C17orf102A2RUQ5 167 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 TMEM150BA6NC51 233 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 TRIM43BA6NCK2 446 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 ZBTB42B2RXF5 422 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 OATP04181 439 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 ITGB8P26012 769 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 SLC26A2P50443 739 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.16e-8■■□□□ 14.4
COL18A1-206ENST00000459895 IGBP1P78318 339 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 CYP4A11Q02928 519 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 SF3A1Q15459 793 aaKnown RBP14.42□□□□□ -0.1
COL18A1-206ENST00000459895 IL17AQ16552 155 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 PTGISQ16647 500 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 ATP6V0A1Q93050 837 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 TRIM43Q96BQ3 446 aaPredicted RBP14.42□□□□□ -0.1
COL18A1-206ENST00000459895 DYDC2Q96IM9 177 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 USP28Q96RU2 1077 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 SEZ6LQ9BYH1 1024 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 PPP1R12CQ9BZL4 782 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 ZSCAN16Q9H4T2 348 aaPredicted RBP14.42□□□□□ -0.1
COL18A1-206ENST00000459895 SETD4Q9NVD3 440 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 SEPT9Q9UHD8 586 aaPredicted RBP14.42□□□□□ -0.1
COL18A1-206ENST00000459895 PCDHA12Q9UN75 941 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 ZDHHC9Q9Y397 364 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 CLIC4Q9Y696 253 aa14.42□□□□□ -0.1
COL18A1-206ENST00000459895 POTEB3A0JP26 581 aa14.41□□□□□ -0.1
COL18A1-206ENST00000459895 PP2D1A8MPX8 630 aa14.41□□□□□ -0.1
COL18A1-206ENST00000459895 RBAK-RBAKDNI3L0D1 243 aa14.41□□□□□ -0.1
COL18A1-206ENST00000459895 LAD1O00515 517 aa14.41□□□□□ -0.1
COL18A1-206ENST00000459895 KIAA0355O15063 1070 aa14.41□□□□□ -0.1
COL18A1-206ENST00000459895 BRD1O95696 1058 aa14.41□□□□□ -0.1
COL18A1-206ENST00000459895 DDIT3P35638 169 aa14.41□□□□□ -0.1
COL18A1-206ENST00000459895 PRPHP41219 470 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms