RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 RUFY4Q6ZNE9 571 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 PEX26Q7Z412 305 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 ZMYND12Q9H0C1 365 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 PANK4Q9NVE7 773 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 DONSONQ9NYP3 566 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 MCM8Q9UJA3 840 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 PCDHGC5Q9Y5F6 944 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 H0YGN5 161 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 LDHBP07195 334 aaKnown RBP12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 CLTAP09496 248 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 PSEN1P49768 467 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 CLNS1AP54105 237 aaKnown RBP12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 NAA25Q14CX7 972 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 PREPLQ4J6C6 727 aaPredicted RBP12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 HERC4Q5GLZ8 1057 aaPredicted RBP12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 DCAF17Q5H9S7 520 aaPredicted RBP12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 FAM26FQ5R3K3 315 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 C12orf60Q5U649 245 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 DAAM2Q86T65 1068 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 RAD54LQ92698 747 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 NFS1Q9Y697 457 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 LRP5O75197 1615 aa12.66□□□□□ -0.38
UBE2L3-202ENST00000458578 E9PMD0 336 aa12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 PGRMC1O00264 195 aaKnown RBP12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 SKAP2O75563 359 aaPredicted RBP12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 EZRP15311 586 aaKnown RBP12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 GBP2P32456 591 aaPredicted RBP12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 IFNAR2P48551 515 aa12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 UBE2SQ16763 222 aa12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 FAM133BQ5BKY9 247 aaKnown RBP12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 SPTY2D1Q68D10 685 aaPredicted RBP12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 ZNF571Q7Z3V5 609 aaPredicted RBP12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 SGSM3Q96HU1 749 aa12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 PVALEFA0A1B0GWK0 134 aa12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 ADAM9Q13443 819 aa12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 SLC24A3Q9HC58 644 aa12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 PLCH1Q4KWH8 1693 aa12.65□□□□□ -0.38
UBE2L3-202ENST00000458578 RBAK-RBAKDNI3L0D1 243 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 RAD21O60216 631 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 PDE6BP35913 854 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 KCNH2Q12809 1159 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 ALKBH5Q6P6C2 394 aaKnown RBP12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 DAGLBQ8NCG7 672 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 ARAP2Q8WZ64 1704 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 CAND2O75155 1236 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 ABCB4P21439 1286 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 PAX7P23759 505 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 SLCO1A2P46721 670 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 CUL1Q13616 776 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 ACCSLQ4AC99 568 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 GALNT17Q6IS24 598 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 GJB7Q6PEY0 223 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 TBC1D1Q86TI0 1168 aaPredicted RBP12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 NEBLO76041 1014 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 SHBGP04278 402 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 CDC25CP30307 473 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 USP11P51784 963 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 BYSLQ13895 437 aaKnown RBP12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 NFIXQ14938 502 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 PSMD1Q99460 953 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 PAGR1Q9BTK6 254 aa12.64□□□□□ -0.39
UBE2L3-202ENST00000458578 SRCAPQ6ZRS2 3230 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 GNPATO15228 680 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 FGGP02679 453 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 ZNF211Q13398 564 aaPredicted RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 NBPF9Q3BBW0 867 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 LRIG3Q6UXM1 1119 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 U2AF1L4Q8WU68 220 aaKnown RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 THOC1Q96FV9 657 aaKnown RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 SEPT11Q9NVA2 429 aaKnown RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 STK17AQ9UEE5 414 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 KIAA1024Q9UPX6 916 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 CD2APQ9Y5K6 639 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 VIMP08670 466 aaKnown RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 BIRC3Q13489 604 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 SBK1Q52WX2 424 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 TMC3Q7Z5M5 1100 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 TAX1BP1Q86VP1 789 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 GLG1Q92896 1179 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 TATDN2Q93075 761 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 EYA3Q99504 573 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.63□□□□□ -0.392e-11■□□□□ 11.3
UBE2L3-202ENST00000458578 RAB34Q9BZG1 259 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 NUCKS1Q9H1E3 243 aaKnown RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 GPCPD1Q9NPB8 672 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 A1CFQ9NQ94 594 aaKnown RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 BMP2KQ9NSY1 1161 aaPredicted RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 UTP11Q9Y3A2 253 aaKnown RBP12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 L3MBTL1Q9Y468 752 aa12.63□□□□□ -0.39
UBE2L3-202ENST00000458578 NR2F2P24468 414 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms