RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 MAPKAPK5Q8IW41 473 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 CSGALNACT2Q8N6G5 542 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 GIMAP8Q8ND71 665 aaPredicted RBP13□□□□□ -0.33
SYNE2-207ENST00000458046 HNRNPLLQ8WVV9 542 aaKnown RBP13□□□□□ -0.33
SYNE2-207ENST00000458046 CENPTQ96BT3 561 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 KBTBD4Q9NVX7 518 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 ANKIB1Q9P2G1 1089 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 L1RE1Q9UN81 338 aa13□□□□□ -0.33
SYNE2-207ENST00000458046 STXBP3O00186 592 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 CCNT1O60563 726 aaKnown RBP12.99□□□□□ -0.33
SYNE2-207ENST00000458046 ERLIN1O75477 346 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 PLCG1P19174 1290 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 HERVK_113P62684 666 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 AMPD2Q01433 879 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 TXNRD1Q16881 649 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 CCDC178Q5BJE1 867 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 CCDC122Q5T0U0 273 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 HPS3Q969F9 1004 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 TUBGCP2Q9BSJ2 902 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 BARHL2Q9NY43 387 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 MYO1AQ9UBC5 1043 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 CAPN11Q9UMQ6 739 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 MYH8P13535 1937 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 POTEB2H3BUK9 544 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 NKRFO15226 690 aaKnown RBP eCLIP12.99□□□□□ -0.33
SYNE2-207ENST00000458046 RHOBTB3O94955 611 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 TRIM21P19474 475 aaKnown RBP12.99□□□□□ -0.33
SYNE2-207ENST00000458046 POU3F3P20264 500 aaPredicted RBP12.99□□□□□ -0.33
SYNE2-207ENST00000458046 EEF1GP26641 437 aaKnown RBP12.99□□□□□ -0.33
SYNE2-207ENST00000458046 GNAQP50148 359 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 STK4Q13043 487 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 PTK7Q13308 1070 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 KCNB1Q14721 858 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 TTI2Q6NXR4 508 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 CABP7Q86V35 215 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 APPL2Q8NEU8 664 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 VMP1Q96GC9 406 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 THAP9Q9H5L6 903 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 RMI1Q9H9A7 625 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 VPS18Q9P253 973 aa12.99□□□□□ -0.33
SYNE2-207ENST00000458046 C19orf81C9J6K1 198 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 ATP1A1P05023 1023 aaKnown RBP12.98□□□□□ -0.33
SYNE2-207ENST00000458046 FCER1AP12319 257 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 LMAN1P49257 510 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 SLC15A2Q16348 729 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 ANKRD40Q6AI12 368 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 SPICE1Q8N0Z3 855 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 CAPZA3Q96KX2 299 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 DNAJC7Q99615 494 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 TCP11L1Q9NUJ3 509 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 CNTN3Q9P232 1028 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 MAFFQ9ULX9 164 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 MPHOSPH10O00566 681 aaKnown RBP12.98□□□□□ -0.33
SYNE2-207ENST00000458046 EPB42P16452 691 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 TECP42680 631 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 NAPAP54920 295 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 GPS2Q13227 327 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 TPTE2Q6XPS3 522 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 KIAA1328Q86T90 577 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 CCSER1Q9C0I3 900 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 EXOC1Q9NV70 894 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 DUSP10Q9Y6W6 482 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
SYNE2-207ENST00000458046 PDS5AQ29RF7 1337 aaKnown RBP12.98□□□□□ -0.33
SYNE2-207ENST00000458046 RCCD1A6NED2 376 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 RASSF10A6NK89 507 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 PHACTR2O75167 634 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 ZPR1O75312 459 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 TM4SF1P30408 202 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 DNM2P50570 870 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 INHBEP58166 350 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 ASIC1P78348 528 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 TXLNBQ8N3L3 684 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
SYNE2-207ENST00000458046 ANKS1AQ92625 1134 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 LACRTQ9GZZ8 138 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
SYNE2-207ENST00000458046 SUN2Q9UH99 717 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 SMCO2A6NFE2 343 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 BOLA2-SMG1P6H3BVE0 249 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 MTIF2P46199 727 aaKnown RBP12.97□□□□□ -0.33
SYNE2-207ENST00000458046 MASP1P48740 699 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 CYP27A1Q02318 531 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 CASP8Q14790 479 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-207ENST00000458046 PARP2Q9UGN5 583 aa12.97□□□□□ -0.33
SYNE2-207ENST00000458046 FAM221BA6H8Z2 402 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 PRRT4C9JH25 899 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 QPCTQ16769 361 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms