RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 EIF4A3P38919 411 aaKnown RBP18.4■□□□□ 0.54
CCDC43-202ENST00000457422 UBXN2AP68543 259 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 GABPB1Q06547 395 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-202ENST00000457422 GPIHBP1Q8IV16 184 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 RUSC1Q9BVN2 902 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 IFIH1Q9BYX4 1025 aaKnown RBP18.4■□□□□ 0.54
CCDC43-202ENST00000457422 ARFGAP3Q9NP61 516 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 FBXO28Q9NVF7 368 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 RGL1Q9NZL6 768 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 SAR1BQ9Y6B6 198 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 SEC31AO94979 1220 aaKnown RBP18.39■□□□□ 0.53
CCDC43-202ENST00000457422 ATP1A1P05023 1023 aaKnown RBP18.39■□□□□ 0.53
CCDC43-202ENST00000457422 NR2F2P24468 414 aa18.39■□□□□ 0.53
CCDC43-202ENST00000457422 LRCH2Q5VUJ6 765 aa18.39■□□□□ 0.53
CCDC43-202ENST00000457422 HGSNATQ68CP4 663 aa18.39■□□□□ 0.53
CCDC43-202ENST00000457422 KRT26Q7Z3Y9 468 aa18.39■□□□□ 0.53
CCDC43-202ENST00000457422 HNRNPLLQ8WVV9 542 aaKnown RBP18.39■□□□□ 0.53
CCDC43-202ENST00000457422 SECISBP2LQ93073 1101 aaKnown RBP18.39■□□□□ 0.53
CCDC43-202ENST00000457422 OLFML3Q9NRN5 406 aa18.39■□□□□ 0.53
CCDC43-202ENST00000457422 PCDHA13Q9Y5I0 950 aa18.39■□□□□ 0.53
CCDC43-202ENST00000457422 RSPH10B2B2RC85 870 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 ASNSP08243 561 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 RSPH10BP0C881 870 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 MYBP10242 640 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 HOXD13P35453 343 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 CXCL9Q07325 125 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 NBPF9Q3BBW0 867 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 CEP55Q53EZ4 464 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 LSM14BQ9BX40 385 aaKnown RBP18.38■□□□□ 0.53
CCDC43-202ENST00000457422 DEF6Q9H4E7 631 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 SHTN1A0MZ66 631 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 ENC1O14682 589 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 PJA2O43164 708 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 CALUO43852 315 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-202ENST00000457422 TBCAO75347 108 aaKnown RBP18.38■□□□□ 0.53
CCDC43-202ENST00000457422 TUBBP07437 444 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 GAP43P17677 238 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 SETQ01105 290 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-202ENST00000457422 CTTNQ14247 550 aaKnown RBP18.38■□□□□ 0.53
CCDC43-202ENST00000457422 RINT1Q6NUQ1 792 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 DEFB132Q7Z7B7 95 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 TRIM58Q8NG06 486 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 SLC16A10Q8TF71 515 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 HDAC6Q9UBN7 1215 aa18.38■□□□□ 0.53
CCDC43-202ENST00000457422 RBAK-RBAKDNI3L0D1 243 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 WNT10BO00744 389 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 CHMP2AO43633 222 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 AKR1B10O60218 316 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 SLITRK3O94933 977 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 PTGER2P43116 358 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 PRELPP51888 382 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 LDHDQ86WU2 507 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 TXLNBQ8N3L3 684 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 RPGRIP1Q96KN7 1286 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 TYW1Q9NV66 732 aaKnown RBP18.37■□□□□ 0.53
CCDC43-202ENST00000457422 DUSP10Q9Y6W6 482 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 PRPF6O94906 941 aaKnown RBP18.37■□□□□ 0.53
CCDC43-202ENST00000457422 PLA2G4AP47712 749 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 KCNH2Q12809 1159 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 B3GNT9Q6UX72 402 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 DYDC2Q96IM9 177 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 WDR11Q9BZH6 1224 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 BCAS3Q9H6U6 928 aa18.37■□□□□ 0.53
CCDC43-202ENST00000457422 SCAF8Q9UPN6 1271 aaKnown RBP18.37■□□□□ 0.53
CCDC43-202ENST00000457422 FER1L6Q2WGJ9 1857 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 MACROD2A1Z1Q3 448 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 EIF3DO15371 548 aaKnown RBP eCLIP18.36■□□□□ 0.53
CCDC43-202ENST00000457422 SLC16A3O15427 465 aaKnown RBP18.36■□□□□ 0.53
CCDC43-202ENST00000457422 SERPING1P05155 500 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 HSD17B4P51659 736 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 CKAP4Q07065 602 aaKnown RBP18.36■□□□□ 0.53
CCDC43-202ENST00000457422 SLC9C1Q4G0N8 1177 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 SFMBT2Q5VUG0 894 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 C1orf186Q6ZWK4 172 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 PIGOQ8TEQ8 1089 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
CCDC43-202ENST00000457422 GANQ9H2C0 597 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 POLD4Q9HCU8 107 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 NLRC4Q9NPP4 1024 aa18.36■□□□□ 0.53
CCDC43-202ENST00000457422 GAS7O60861 476 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 TACC1O75410 805 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 SASH3O75995 380 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 ICAM1P05362 532 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 TPH2Q8IWU9 490 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 PNKPQ96T60 521 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 CRACR2AQ9BSW2 395 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 ZNF341Q9BYN7 854 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 UBXN6Q9BZV1 441 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 MYOZ2Q9NPC6 264 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 ARMCX3Q9UH62 379 aaPredicted RBP18.35■□□□□ 0.53
CCDC43-202ENST00000457422 JRKLQ9Y4A0 524 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 ASTN1O14525 1302 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 FRMPD4Q14CM0 1322 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 TLR2O60603 784 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 RPL13P26373 211 aaKnown RBP18.35■□□□□ 0.53
CCDC43-202ENST00000457422 BAG6P46379 1132 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 POLR2FP61218 127 aaKnown RBP18.35■□□□□ 0.53
CCDC43-202ENST00000457422 APBA1Q02410 837 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms