RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ALDH8A1Q9H2A2 487 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CD209Q9NNX6 404 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 PALMDQ9NP74 551 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CACNA2D2Q9NY47 1150 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 TRMT112Q9UI30 125 aaKnown RBP5.6□□□□□ -1.51
CSMD3-204ENST00000455883 ANAPC5Q9UJX4 755 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 SLC13A4Q9UKG4 626 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 CREBBPQ92793 2442 aa5.6□□□□□ -1.51
CSMD3-204ENST00000455883 MAGEB6P1A0A0J9YX57 407 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MYO1CO00159 1063 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 KRT75O95678 551 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 COPB2P35606 906 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 LIFRP42702 1097 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 CASP8Q14790 479 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MYSM1Q5VVJ2 828 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 SMYD5Q6GMV2 418 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 SLFN12LQ6IEE8 588 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MIGA2Q7L4E1 593 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 TSPYL6Q8N831 410 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 BEST2Q8NFU1 509 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 RMND5BQ96G75 393 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 TMOD1P28289 359 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ART3Q13508 389 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 VPS37AQ8NEZ2 397 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MTERF3Q96E29 417 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 PPP1R13BQ96KQ4 1090 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ZMYND12Q9H0C1 365 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 WWP1Q9H0M0 922 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 STX18Q9P2W9 335 aaKnown RBP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ABCC4O15439 1325 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 SH3TC1Q8TE82 1336 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 TLDC2A0PJX2 215 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 H0YC42 278 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 TBXAS1P24557 533 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 SERPINB1P30740 379 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 SNX17Q15036 470 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 KRT24Q2M2I5 525 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 SUPT20HQ8NEM7 779 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 SIRT1Q96EB6 747 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 FGD4Q96M96 766 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 AKAP12Q02952 1782 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 DOCK9Q9BZ29 2069 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 KRT20P35900 424 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 RUNX1T1Q06455 604 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ASPRV1Q53RT3 343 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 SLC12A6Q9UHW9 1150 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ZNF644Q9H582 1327 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 PTCH1Q13635 1447 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 CUL9Q8IWT3 2517 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 A0A1W2PQC6 194 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ARHGEF35A5YM69 484 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ABCB1P08183 1280 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 IL10P22301 178 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 CDC27P30260 824 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ADCY8P40145 1251 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MFAP3P55082 362 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 QKIQ96PU8 341 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 BICRAQ9NZM4 1560 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 WNK1Q9H4A3 2382 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 PFKFB2O60825 505 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 KATNA1O75449 491 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 HEXIM1O94992 359 aaKnown RBP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 RAP1GAPP47736 663 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 CDC42EP1Q00587 391 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MAPK6Q16659 721 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 P3H1Q32P28 736 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 PALB2Q86YC2 1186 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ASZ1Q8WWH4 475 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 PBXIP1Q96AQ6 731 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 PRDM10Q9NQV6 1147 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MPDZO75970 2070 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MCM7P33993 719 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 NCAPG2Q86XI2 1143 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 C2CD5Q86YS7 1000 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 WDR11Q9BZH6 1224 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 C1orf115Q9H7X2 142 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ZDBF2Q9HCK1 2354 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 FDX1P10109 184 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 CIITAP33076 1130 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 CCR3P51677 355 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 GUCY1A3Q02108 690 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 INPP5AQ14642 412 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 CNGA3Q16281 694 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ZBTB8OSQ8IWT0 167 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 FBXL13Q8NEE6 735 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 CALML6Q8TD86 181 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 NELFBQ8WX92 580 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 INTUQ9ULD6 942 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MAPRE3Q9UPY8 281 aa5.59□□□□□ -1.51
CSMD3-204ENST00000455883 ARHGEF17Q96PE2 2063 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-204ENST00000455883 MSH2P43246 934 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 MRPL28Q13084 256 aaKnown RBP5.59□□□□□ -1.52
CSMD3-204ENST00000455883 PCNX4Q63HM2 1172 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 ZFP1Q6P2D0 407 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 CPLX3Q8WVH0 158 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 PRDM16Q9HAZ2 1276 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 SORCS3Q9UPU3 1222 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 CDY2AQ9Y6F7 541 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms