RNA–Protein interactions for RNA: ENST00000454741.5

TTC28-AS1-219, TTC28 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene TTC28-AS1, Length 5,064 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-219ENST00000454741 LRRC4Q9HBW1 653 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 ADRA2BP18089 450 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 RAPH1Q70E73 1250 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 PDIK1LQ8N165 341 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 DONSONQ9NYP3 566 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 LARGE1O95461 756 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 COG7P83436 770 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 ALX1Q15699 326 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 ANKRD20A4Q4UJ75 823 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 ANKRD20A8PQ5CZ79 823 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 ANKRD20A2Q5SQ80 823 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 ANKRD20A1Q5TYW2 823 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 PI16Q6UXB8 463 aa16.46■□□□□ 0.23
TTC28-AS1-219ENST00000454741 PRPSAP2O60256 369 aa16.46■□□□□ 0.22
TTC28-AS1-219ENST00000454741 FTCDO95954 541 aa16.46■□□□□ 0.22
TTC28-AS1-219ENST00000454741 SERPINB6P35237 376 aa16.46■□□□□ 0.22
TTC28-AS1-219ENST00000454741 DR1Q01658 176 aa16.46■□□□□ 0.22
TTC28-AS1-219ENST00000454741 SRRM1Q8IYB3 904 aaKnown RBP16.46■□□□□ 0.22
TTC28-AS1-219ENST00000454741 GOLGA8SH3BPF8 625 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 NOC2LQ9Y3T9 749 aaKnown RBP16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 GDF11O95390 407 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 ASNSP08243 561 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CYP4F22Q6NT55 531 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 MCPH1Q8NEM0 835 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PRDM15P57071 1507 aaPredicted RBP16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 USP17L3A6NCW0 530 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 USP17L4A6NCW7 530 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 LGALS16A8MUM7 142 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 NNTQ13423 1086 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 DARS2Q6PI48 645 aaKnown RBP16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CENPUQ71F23 418 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 USP17L1Q7RTZ2 530 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 KLHL29Q96CT2 875 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CEP72Q9P209 647 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 IFRD2Q12894 506 aaPredicted RBP16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PFKFB3Q16875 520 aaPredicted RBP16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 DNAAF3Q8N9W5 541 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 TCP11Q8WWU5 503 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PIGBQ92521 554 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PCIF1Q9H4Z3 704 aa16.45■□□□□ 0.22
TTC28-AS1-219ENST00000454741 LRRD1A4D1F6 860 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 F8W8V4 182 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 SAT1P21673 171 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 FBXO41Q8TF61 875 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 FAM20AQ96MK3 541 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 DRC3Q9H069 523 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 ALDH8A1Q9H2A2 487 aaPredicted RBP16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PPP1R9AQ9ULJ8 1098 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 UBXN2AP68543 259 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 C2orf54Q08AI8 447 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CASP8Q14790 479 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PDXDC2PQ6P474 469 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CCNYQ8ND76 341 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CPSF3Q9UKF6 684 aaKnown RBP16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PRAMEF22A3QJZ6 481 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 K7ERI5 159 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 SEC31AO94979 1220 aaKnown RBP16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 ZNF449Q6P9G9 518 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 KCTD6Q8NC69 237 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 MASTLQ96GX5 879 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PGBD1Q96JS3 809 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 FAM167AQ96KS9 214 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 FAM8A1Q9UBU6 413 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 ANGPTL3Q9Y5C1 460 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 KIF1BO60333 1816 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 IQANK1A0A1B0GTG1 560 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 EXOC1LA0A1B0GW35 172 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 MEIS1O00470 390 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 PPFIA2O75334 1257 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 NR1D1P20393 614 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 KRT39Q6A163 491 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 SCYL3Q8IZE3 742 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 TTC13Q8NBP0 860 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 RRP15Q9Y3B9 282 aaKnown RBP16.44■□□□□ 0.22
TTC28-AS1-219ENST00000454741 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 SORBS3O60504 671 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 BASP1P80723 227 aaKnown RBP16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 TMED2Q15363 201 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 DYNLL2Q96FJ2 89 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 RFX1P22670 979 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 MCAMP43121 646 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 THOC5Q13769 683 aaKnown RBP16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 TRIM68Q6AZZ1 485 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 OR6B2Q6IFH4 312 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CALN1Q9BXU9 219 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 DBNDD1Q9H9R9 158 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 RPF1Q9H9Y2 349 aaKnown RBP16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 FGFR1OP2Q9NVK5 253 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 SYNJ2BP-COX16A0A087WUM0 186 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 COBLO75128 1261 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 CDC25AP30304 524 aa16.43■□□□□ 0.22
TTC28-AS1-219ENST00000454741 GOLGA8FQ08AF8 430 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms