RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 CA3P07451 260 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 FAM86B2P0C5J1 330 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 IGFBP4P22692 258 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 SLC26A2P50443 739 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 STAT5BP51692 787 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 IGBP1P78318 339 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 ANKRD1Q15327 319 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 PLPPR4Q7Z2D5 763 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX39A-203ENST00000454233 DBF4BQ8NFT6 615 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 RASGRP4Q8TDF6 673 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 CRYGNQ8WXF5 182 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 PCYT2Q99447 389 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 ZNF577Q9BSK1 485 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 C22orf23Q9BZE7 217 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 SLKQ9H2G2 1235 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-203ENST00000454233 TBC1D22BQ9NU19 505 aa12.14□□□□□ -0.47
DDX39A-203ENST00000454233 IGLV3-22A0A075B6J6 115 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 ADAMTS3O15072 1205 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 ATG7O95352 703 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 AMHP03971 560 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 INSRRP14616 1297 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 DEFB103AP81534 67 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 TCTN1Q2MV58 587 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 PRR16Q569H4 304 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 PLEKHG4Q58EX7 1191 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 MIS18BP1Q6P0N0 1132 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 RPAINQ86UA6 219 aa12.13□□□□□ -0.47
DDX39A-203ENST00000454233 FAM177A1Q8N128 213 aaPredicted RBP12.13□□□□□ -0.47
DDX39A-203ENST00000454233 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 MBLAC1A4D2B0 266 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-203ENST00000454233 CCNE2O96020 404 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 CIITAP33076 1130 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 USP11P51784 963 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 PLCB4Q15147 1175 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 GALNT17Q6IS24 598 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 RUFY4Q6ZNE9 571 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 MYOCDQ8IZQ8 938 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 DNAJB3Q8WWF6 145 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 APBB2Q92870 758 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 RAD9AQ99638 391 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 ZNF302Q9NR11 478 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 PCDHA4Q9UN74 947 aa12.12□□□□□ -0.47
DDX39A-203ENST00000454233 IGKV6D-21A0A0A0MT36 114 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 M0QZ92 97 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 DHX15O43143 795 aaKnown RBP12.11□□□□□ -0.47
DDX39A-203ENST00000454233 HBP1O60381 514 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 GJB5O95377 273 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 XBP1P17861 261 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 KRT76Q01546 638 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 TAP1Q03518 808 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 SCRN1Q12765 414 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 MARCH8Q5T0T0 291 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 ZNF746Q6NUN9 644 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-203ENST00000454233 FAM117BQ6P1L5 589 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 ABHD15Q6UXT9 468 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 TMCO2Q7Z6W1 182 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-203ENST00000454233 CKAP2LQ8IYA6 745 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 SMAP1Q8IYB5 467 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-203ENST00000454233 BLIDQ8IZY5 108 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 PPM1EQ8WY54 764 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 UIMC1Q96RL1 719 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 IFIH1Q9BYX4 1025 aaKnown RBP12.11□□□□□ -0.47
DDX39A-203ENST00000454233 FAM49AQ9H0Q0 323 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-203ENST00000454233 CERS4Q9HA82 394 aa12.11□□□□□ -0.47
DDX39A-203ENST00000454233 DLL1O00548 723 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 GTPBP6O43824 516 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-203ENST00000454233 PFKFB2O60825 505 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 CHRNA1P02708 482 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 PSAPP07602 524 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 GHRP10912 638 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 AK2P54819 239 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 MRPS6P82932 125 aaKnown RBP12.1□□□□□ -0.47
DDX39A-203ENST00000454233 ADGRE1Q14246 886 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 IER5Q5VY09 327 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■■■□ 20.8
DDX39A-203ENST00000454233 CCDC60Q8IWA6 550 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-203ENST00000454233 DAGLBQ8NCG7 672 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 TBCKQ8TEA7 893 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 ATP8B4Q8TF62 1192 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 TRAPPC12Q8WVT3 735 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 ARNTL2Q8WYA1 636 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 INSL6Q9Y581 213 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 PCDHA10Q9Y5I2 948 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 CDY2AQ9Y6F7 541 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 STK36Q9NRP7 1315 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 COL6A3P12111 3177 aa12.1□□□□□ -0.47
DDX39A-203ENST00000454233 COL1A2P08123 1366 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 WDR64B1ANS9 1081 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 GAS7O60861 476 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 MGAT3Q09327 533 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms