RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 SPRED2Q7Z698 418 aa18.74■□□□□ 0.59
NCKIPSD-208ENST00000454134 PLA2G4DQ86XP0 818 aa18.74■□□□□ 0.59
NCKIPSD-208ENST00000454134 CRYGNQ8WXF5 182 aa18.74■□□□□ 0.59
NCKIPSD-208ENST00000454134 TM6SF1Q9BZW5 370 aa18.74■□□□□ 0.59
NCKIPSD-208ENST00000454134 KAT6AQ92794 2004 aa18.74■□□□□ 0.59
NCKIPSD-208ENST00000454134 IGLV3-22A0A075B6J6 115 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 EPOPA6NHQ4 379 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 CAND2O75155 1236 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 CCNE2O96020 404 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 STK3Q13188 491 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 MARCH8Q5T0T0 291 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 NIPA1Q7RTP0 329 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 ARNTL2Q8WYA1 636 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 AZI2Q9H6S1 392 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 PRDM6Q9NQX0 595 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 PDRG1Q9NUG6 133 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 TUBE1Q9UJT0 475 aa18.73■□□□□ 0.59
NCKIPSD-208ENST00000454134 EFCAB14O75071 495 aa18.72■□□□□ 0.59
NCKIPSD-208ENST00000454134 CHRNA1P02708 482 aa18.72■□□□□ 0.59
NCKIPSD-208ENST00000454134 CYP3A4P08684 503 aa18.72■□□□□ 0.59
NCKIPSD-208ENST00000454134 INSRRP14616 1297 aa18.72■□□□□ 0.59
NCKIPSD-208ENST00000454134 GNA11P29992 359 aa18.72■□□□□ 0.59
NCKIPSD-208ENST00000454134 ERICH6BQ5W0A0 696 aa18.72■□□□□ 0.59
NCKIPSD-208ENST00000454134 SEPT8Q92599 483 aa18.72■□□□□ 0.59
NCKIPSD-208ENST00000454134 TRPC6Q9Y210 931 aa18.72■□□□□ 0.59
NCKIPSD-208ENST00000454134 MBLAC1A4D2B0 266 aaPredicted RBP18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 GJB5O95377 273 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 STAT5BP51692 787 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 SSRP1Q08945 709 aaKnown RBP18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 MKRN4PQ13434 485 aaPredicted RBP18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 PLCB4Q15147 1175 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 FAM26DQ5JW98 314 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 MCTP2Q6DN12 878 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 TAF2Q6P1X5 1199 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 MYOCDQ8IZQ8 938 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 MICALL1Q8N3F8 863 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 CCDC148Q8NFR7 591 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 TRAPPC12Q8WVT3 735 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 DNAJB3Q8WWF6 145 aa18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 ZNF274Q96GC6 653 aaPredicted RBP18.71■□□□□ 0.59
NCKIPSD-208ENST00000454134 IPO5O00410 1097 aaKnown RBP18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 CPLX1O14810 134 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 DHX15O43143 795 aaKnown RBP18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 ATG7O95352 703 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 AMHP03971 560 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 NLRP5P59047 1200 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 PRR16Q569H4 304 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 MICAL3Q7RTP6 2002 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 PLPPR4Q7Z2D5 763 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 TRIM22Q8IYM9 498 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 BICD2Q8TD16 824 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 RAD9AQ99638 391 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 ZNF577Q9BSK1 485 aa18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 COL25A1Q9BXS0 654 aaPredicted RBP18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 FAM49AQ9H0Q0 323 aaPredicted RBP18.7■□□□□ 0.58
NCKIPSD-208ENST00000454134 RRN3P2A6NIE6 340 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 BACH1O14867 736 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 DTNBO60941 627 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 GHRP10912 638 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 MGAT3Q09327 533 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 KRT40Q6A162 431 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 ABHD15Q6UXT9 468 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 RPAINQ86UA6 219 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 AIFM3Q96NN9 605 aa18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 IFIH1Q9BYX4 1025 aaKnown RBP18.69■□□□□ 0.58
NCKIPSD-208ENST00000454134 SIP14410 1827 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 IGKV6D-21A0A0A0MT36 114 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 POTEB3A0JP26 581 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 EDIL3O43854 480 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 POTEBQ6S5H4 581 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 RSPH3Q86UC2 560 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 CCDC60Q8IWA6 550 aaPredicted RBP18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 SH3GLB2Q9NR46 395 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 MTUS1Q9ULD2 1270 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 CDY2AQ9Y6F7 541 aa18.68■□□□□ 0.58
NCKIPSD-208ENST00000454134 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 UPP2O95045 317 aa18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 CIITAP33076 1130 aa18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 SETQ01105 290 aaPredicted RBP18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 TMEM62Q0P6H9 643 aa18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 LPIN1Q14693 890 aa18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 SWSAP1Q6NVH7 229 aa18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 PDXDC2PQ6P474 469 aa18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 LENG9Q96B70 501 aa18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 MTCH2Q9Y6C9 303 aa18.67■□□□□ 0.58
NCKIPSD-208ENST00000454134 LINC01553A4QN01 128 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 DEXIO95424 95 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 MRPS6P82932 125 aaKnown RBP18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 SCRN1Q12765 414 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 GRB10Q13322 594 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 FAM160B1Q5W0V3 765 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 MIS18BP1Q6P0N0 1132 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 CPLX2Q6PUV4 134 aaKnown RBP18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 TNPO1Q92973 898 aaKnown RBP18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 ZNF302Q9NR11 478 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 TBC1D22BQ9NU19 505 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 TPCN1Q9ULQ1 816 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 PCDHA4Q9UN74 947 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 INSL6Q9Y581 213 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 PCDHA2Q9Y5H9 948 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms