RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DEF6Q9H4E7 631 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
VTA1-203ENST00000452973 SIK3Q9Y2K2 1263 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 WDR46O15213 610 aaKnown RBP13.01□□□□□ -0.33
VTA1-203ENST00000452973 FAM13AO94988 1023 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 KIF20AO95235 890 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 EYA4O95677 639 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 CBX1P83916 185 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 MAP3K10Q02779 954 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 ARID5AQ03989 594 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 POLR3CQ9BUI4 534 aaPredicted RBP13.01□□□□□ -0.33
VTA1-203ENST00000452973 MRFAP1Q9Y605 127 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 PITPNM2Q9BZ72 1349 aa13.01□□□□□ -0.33
VTA1-203ENST00000452973 ZNF541Q9H0D2 1346 aa13□□□□□ -0.33
VTA1-203ENST00000452973 CTAGE9A4FU28 777 aa13□□□□□ -0.33
VTA1-203ENST00000452973 ENC1O14682 589 aa13□□□□□ -0.33
VTA1-203ENST00000452973 CTNND1O60716 968 aaKnown RBP13□□□□□ -0.33
VTA1-203ENST00000452973 NMT1P30419 496 aaKnown RBP13□□□□□ -0.33
VTA1-203ENST00000452973 HERVK_113P62684 666 aa13□□□□□ -0.33
VTA1-203ENST00000452973 ZC2HC1CQ53FD0 456 aaPredicted RBP13□□□□□ -0.33
VTA1-203ENST00000452973 TCERG1LQ5VWI1 586 aa13□□□□□ -0.33
VTA1-203ENST00000452973 SLC5A5Q92911 643 aa13□□□□□ -0.33
VTA1-203ENST00000452973 KCNH7Q9NS40 1196 aa13□□□□□ -0.33
VTA1-203ENST00000452973 DUSP10Q9Y6W6 482 aa13□□□□□ -0.33
VTA1-203ENST00000452973 MACROD2A1Z1Q3 448 aa13□□□□□ -0.33
VTA1-203ENST00000452973 CETN3O15182 167 aa13□□□□□ -0.33
VTA1-203ENST00000452973 RPS12P25398 132 aaKnown RBP13□□□□□ -0.33
VTA1-203ENST00000452973 CYLC1P35663 651 aaPredicted RBP13□□□□□ -0.33
VTA1-203ENST00000452973 KNOP1Q1ED39 458 aaKnown RBP13□□□□□ -0.33
VTA1-203ENST00000452973 DCAF17Q5H9S7 520 aaPredicted RBP13□□□□□ -0.33
VTA1-203ENST00000452973 TEKT3Q9BXF9 490 aa13□□□□□ -0.33
VTA1-203ENST00000452973 KIAA1683Q9H0B3 1180 aa13□□□□□ -0.33
VTA1-203ENST00000452973 ZHX2Q9Y6X8 837 aa13□□□□□ -0.33
VTA1-203ENST00000452973 DLK2Q6UY11 383 aa13□□□□□ -0.33
VTA1-203ENST00000452973 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
VTA1-203ENST00000452973 LPAR1Q92633 364 aa13□□□□□ -0.33
VTA1-203ENST00000452973 TAAR1Q96RJ0 339 aa13□□□□□ -0.33
VTA1-203ENST00000452973 MXRA8Q9BRK3 442 aa13□□□□□ -0.33
VTA1-203ENST00000452973 LXNQ9BS40 222 aa13□□□□□ -0.33
VTA1-203ENST00000452973 FRMD3A2A2Y4 597 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 PLA2G6O60733 806 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 HOXD13P35453 343 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 HMGCS2P54868 508 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 RPS6P62753 249 aaKnown RBP12.99□□□□□ -0.33
VTA1-203ENST00000452973 KCNMA1Q12791 1236 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
VTA1-203ENST00000452973 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 LSM14BQ9BX40 385 aaKnown RBP12.99□□□□□ -0.33
VTA1-203ENST00000452973 LACRTQ9GZZ8 138 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 TADA3O75528 432 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 POLR2FP61218 127 aaKnown RBP12.99□□□□□ -0.33
VTA1-203ENST00000452973 KRT83P78385 493 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 PPP2R5CQ13362 524 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 MEA1Q16626 185 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 TRPM4Q8TD43 1214 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 JAKMIP2Q96AA8 810 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 CCDC94Q9BW85 323 aaPredicted RBP12.99□□□□□ -0.33
VTA1-203ENST00000452973 PICK1Q9NRD5 415 aa12.99□□□□□ -0.33
VTA1-203ENST00000452973 AKR1B10O60218 316 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 EIF4A3P38919 411 aaKnown RBP12.98□□□□□ -0.33
VTA1-203ENST00000452973 SPA17Q15506 151 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 MIER3Q7Z3K6 550 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 TUFT1Q9NNX1 390 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 ARHGAP20Q9P2F6 1191 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
VTA1-203ENST00000452973 CASP4P49662 377 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 HSD17B4P51659 736 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 KCNH2Q12809 1159 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 SYTL5Q8TDW5 730 aaPredicted RBP12.98□□□□□ -0.33
VTA1-203ENST00000452973 CEP63Q96MT8 703 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 NAPGQ99747 312 aaPredicted RBP12.98□□□□□ -0.33
VTA1-203ENST00000452973 HDAC6Q9UBN7 1215 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 RIPK3Q9Y572 518 aa12.98□□□□□ -0.33
VTA1-203ENST00000452973 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 FZD9O00144 591 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 SORBS3O60504 671 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 ZBED4O75132 1171 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 SETQ01105 290 aaPredicted RBP12.97□□□□□ -0.33
VTA1-203ENST00000452973 MTMR1Q13613 665 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 ARHGAP27Q6ZUM4 889 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 MCF2L2Q86YR7 1114 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 TRIM59Q8IWR1 403 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 GGA3Q9NZ52 723 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 ARMCX3Q9UH62 379 aaPredicted RBP12.97□□□□□ -0.33
VTA1-203ENST00000452973 PPP1R9AQ9ULJ8 1098 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 PLAGL2Q9UPG8 496 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 A0A1W2PQJ5 194 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 ARHGEF35A5YM69 484 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 EFCAB8A8MWE9 144 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 SLC26A4O43511 780 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 KRT86O43790 486 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 ACTN1P12814 892 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 MRPS9P82933 396 aaKnown RBP12.97□□□□□ -0.33
VTA1-203ENST00000452973 ODR4Q5SWX8 454 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms