RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 RFXAPO00287 272 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 PDIA3P30101 505 aaKnown RBP14.68□□□□□ -0.06
CHD3-206ENST00000452447 ACTR2P61160 394 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 IGBP1P78318 339 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 CCT2P78371 535 aaKnown RBP14.68□□□□□ -0.06
CHD3-206ENST00000452447 PKN1Q16512 942 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.68□□□□□ -0.061e-11■■■■■ 46.3
CHD3-206ENST00000452447 NIPA1Q7RTP0 329 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 PLA2G4DQ86XP0 818 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 CCDC148Q8NFR7 591 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 BICD2Q8TD16 824 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 SYMPKQ92797 1274 aaKnown RBP14.68□□□□□ -0.06
CHD3-206ENST00000452447 SLC26A6Q9BXS9 759 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 ZSWIM6Q9HCJ5 1215 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 PRDM6Q9NQX0 595 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 TRPC6Q9Y210 931 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 INSL6Q9Y581 213 aa14.68□□□□□ -0.06
CHD3-206ENST00000452447 PPFIA3O75145 1194 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 ARHGEF15O94989 841 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 IFNAR1P17181 557 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 STAT5BP51692 787 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 EVCP57679 992 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 ITGB3BPQ13352 177 aaPredicted RBP14.67□□□□□ -0.06
CHD3-206ENST00000452447 FAM26DQ5JW98 314 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 PLPPR4Q7Z2D5 763 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 RPAINQ86UA6 219 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 APBB2Q92870 758 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 PCYT2Q99447 389 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 IFIH1Q9BYX4 1025 aaKnown RBP14.67□□□□□ -0.06
CHD3-206ENST00000452447 THEGQ9P2T0 379 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 BRWD1Q9NSI6 2320 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 XIRP2A4UGR9 3374 aa14.67□□□□□ -0.06
CHD3-206ENST00000452447 EPOPA6NHQ4 379 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 FAM86B1E9PN63 330 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 DDX39AO00148 427 aaKnown RBP14.66□□□□□ -0.06
CHD3-206ENST00000452447 RPLP2P05387 115 aaKnown RBP14.66□□□□□ -0.06
CHD3-206ENST00000452447 CYP3A4P08684 503 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 FAM86B2P0C5J1 330 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 INSRRP14616 1297 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 NTRK3Q16288 839 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 TJAP1Q5JTD0 557 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 RUFY4Q6ZNE9 571 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 DNAJB3Q8WWF6 145 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 ATXN2LQ8WWM7 1075 aaKnown RBP14.66□□□□□ -0.06
CHD3-206ENST00000452447 NCOA5Q9HCD5 579 aaKnown RBP14.66□□□□□ -0.06
CHD3-206ENST00000452447 PPP4R2Q9NY27 417 aa14.66□□□□□ -0.06
CHD3-206ENST00000452447 MUC3AQ02505 3323 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 EVPLQ92817 2033 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 LOXHD1Q8IVV2 1947 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 MBLAC1A4D2B0 266 aaPredicted RBP14.65□□□□□ -0.06
CHD3-206ENST00000452447 RBAK-RBAKDNI3L0D1 243 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 CPLX1O14810 134 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 BACH1O14867 736 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 CHRNA1P02708 482 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 POU3F3P20264 500 aaPredicted RBP14.65□□□□□ -0.06
CHD3-206ENST00000452447 SLC26A2P50443 739 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 SETQ01105 290 aaPredicted RBP14.65□□□□□ -0.06
CHD3-206ENST00000452447 TOB2Q14106 344 aaPredicted RBP14.65□□□□□ -0.06
CHD3-206ENST00000452447 PLCB4Q15147 1175 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 SKIV2LQ15477 1246 aaKnown RBP14.65□□□□□ -0.06
CHD3-206ENST00000452447 MARCH8Q5T0T0 291 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 TGS1Q96RS0 853 aaKnown RBP14.65□□□□□ -0.06
CHD3-206ENST00000452447 TM6SF1Q9BZW5 370 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 TCEAL9Q9UHQ7 104 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 MTUS1Q9ULD2 1270 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 MTCH2Q9Y6C9 303 aa14.65□□□□□ -0.06
CHD3-206ENST00000452447 LINC01553A4QN01 128 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 IPO5O00410 1097 aaKnown RBP14.64□□□□□ -0.07
CHD3-206ENST00000452447 ATG7O95352 703 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 GHRP10912 638 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
CHD3-206ENST00000452447 IER5Q5VY09 327 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 FAM160B1Q5W0V3 765 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 CPLX2Q6PUV4 134 aaKnown RBP14.64□□□□□ -0.07
CHD3-206ENST00000452447 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 RASGRP4Q8TDF6 673 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 CRYGNQ8WXF5 182 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 YME1L1Q96TA2 773 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 ZNF577Q9BSK1 485 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 OSBPL7Q9BZF2 842 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 UPF3BQ9BZI7 483 aaKnown RBP14.64□□□□□ -0.07
CHD3-206ENST00000452447 FAM49AQ9H0Q0 323 aaPredicted RBP14.64□□□□□ -0.07
CHD3-206ENST00000452447 TBC1D22BQ9NU19 505 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 VPS54Q9P1Q0 977 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 SIP14410 1827 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 IGLV3-22A0A075B6J6 115 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 POTEB3A0JP26 581 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 M0QZ92 97 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 UPP2O95045 317 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 NLRP5P59047 1200 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 MRPS5P82675 430 aaKnown RBP14.64□□□□□ -0.07
CHD3-206ENST00000452447 SSRP1Q08945 709 aaKnown RBP14.64□□□□□ -0.07
CHD3-206ENST00000452447 GRB10Q13322 594 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 PRR16Q569H4 304 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 MIS18BP1Q6P0N0 1132 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 POTEBQ6S5H4 581 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 ABHD15Q6UXT9 468 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 TOP1MTQ969P6 601 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 ZNF274Q96GC6 653 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms