RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 TRIM48Q8IWZ4 208 aa6.42□□□□□ -1.38
GTF3C3-207ENST00000451088 IFNL3Q8IZI9 196 aa6.42□□□□□ -1.38
GTF3C3-207ENST00000451088 WASF3Q9UPY6 502 aa6.42□□□□□ -1.38
GTF3C3-207ENST00000451088 DUSP10Q9Y6W6 482 aa6.42□□□□□ -1.38
GTF3C3-207ENST00000451088 ZNF518AQ6AHZ1 1483 aa6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 DIP2CQ9Y2E4 1556 aa6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 CEP170BQ9Y4F5 1589 aaPredicted RBP6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 ERICH6BQ5W0A0 696 aa6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 DPH6Q7L8W6 267 aa6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 SCUBE1Q8IWY4 988 aa6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 ZBTB38Q8NAP3 1195 aaPredicted RBP6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 UHMK1Q8TAS1 419 aaKnown RBP6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 HIRIP3Q9BW71 556 aaPredicted RBP6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
GTF3C3-207ENST00000451088 VWDEQ8N2E2 1590 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 REREQ9P2R6 1566 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 SLC27A2O14975 620 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 SOD2P04179 222 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 CELA3BP08861 270 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 ZNF28P17035 718 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 GTF2F1P35269 517 aaKnown RBP eCLIP6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 RGL3Q3MIN7 710 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 LRP10Q7Z4F1 713 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 PROSER1Q86XN7 944 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 THEMISQ8N1K5 641 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 CLEC4DQ8WXI8 215 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 TMEM209Q96SK2 561 aa6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 PPP1R1BQ9UD71 204 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-207ENST00000451088 MLH3Q9UHC1 1453 aa6.4□□□□□ -1.39
GTF3C3-207ENST00000451088 LRRC7Q96NW7 1537 aa6.4□□□□□ -1.39
GTF3C3-207ENST00000451088 SAMD9Q5K651 1589 aa6.4□□□□□ -1.39
GTF3C3-207ENST00000451088 DNMT1P26358 1616 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 MROH2AA6NES4 1674 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 ZNF142P52746 1687 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 STRCP1A6NGW2 1772 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 TRBV23-1A0A0A0MS06 115 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 DIAPH1O60610 1272 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 SSRP1Q08945 709 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 SPIRE1Q08AE8 756 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 RASA3Q14644 834 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 LONRF2Q1L5Z9 754 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 UBXN11Q5T124 520 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 FOXB2Q5VYV0 432 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 ZNF772Q68DY9 489 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 GGT6Q6P531 493 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 FERMT3Q86UX7 667 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 CNOT11Q9UKZ1 510 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 FAM135BQ49AJ0 1406 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 A2ML1A8K2U0 1454 aa6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 POLR1AO95602 1720 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-207ENST00000451088 FAM47E-STBD1D6RA91 191 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 DDX3XO00571 662 aaKnown RBP eCLIP6.38□□□□□ -1.392e-7■■■■□ 24.5
GTF3C3-207ENST00000451088 WNT9AO14904 365 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 NKRFO15226 690 aaKnown RBP eCLIP6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 C6orf222P0C671 652 aaPredicted RBP6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 GNAT1P11488 350 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 CNR2P34972 360 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 RANGAP1P46060 587 aaPredicted RBP6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 EPHA5P54756 1037 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 KIAA2012Q0VF49 1180 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 MAMDC2Q7Z304 686 aaPredicted RBP6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 TXNDC5Q8NBS9 432 aaKnown RBP6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 DDX1Q92499 740 aaKnown RBP6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 PTPRN2Q92932 1015 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 CLIC6Q96NY7 704 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 KCNJ15Q99712 375 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 BDH2Q9BUT1 245 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 CDK11AQ9UQ88 783 aaPredicted RBP6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 TRAF6Q9Y4K3 522 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 TELO2Q9Y4R8 837 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 NUB1Q9Y5A7 615 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 KDM5CP41229 1560 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 NEURL4Q96JN8 1562 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 MYO3AQ8NEV4 1616 aa6.38□□□□□ -1.39
GTF3C3-207ENST00000451088 CLTCQ00610 1675 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 ABCA6Q8N139 1617 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 MROH6A6NGR9 719 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 CCDC85CA6NKD9 419 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 AQP7O14520 342 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 CYP7B1O75881 506 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 COL6A2P12110 1019 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 MLLT6P55198 1093 aaPredicted RBP6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 EFEMP1Q12805 493 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 TUSC3Q13454 348 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 FAM209AQ5JX71 171 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 MCTP2Q6DN12 878 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 RBM12BQ8IXT5 1001 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 EXOC2Q96KP1 924 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 ZSWIM3Q96MP5 696 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 WRNIP1Q96S55 665 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 CDC6Q99741 560 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 ALG1Q9BT22 464 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 IPPKQ9H8X2 491 aa6.37□□□□□ -1.39
GTF3C3-207ENST00000451088 FMN1Q68DA7 1419 aa6.36□□□□□ -1.39
GTF3C3-207ENST00000451088 FAM153BP0C7A2 387 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms