RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 NEFLP07196 543 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 CTSHP09668 335 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 ACTR2P61160 394 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 CCT2P78371 535 aaKnown RBP14.1□□□□□ -0.15
MSH5-209ENST00000450148 MGAT3Q09327 533 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 PPFIA1Q13136 1202 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 GRIK4Q16099 956 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 CERS4Q9HA82 394 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 PPP4R2Q9NY27 417 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 NLRC5Q86WI3 1866 aa14.1□□□□□ -0.15
MSH5-209ENST00000450148 PRUNE2Q8WUY3 3088 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 UNC80Q8N2C7 3258 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.09□□□□□ -0.15
MSH5-209ENST00000450148 LPXNO60711 386 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 IGFBP4P22692 258 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 PLA2G4DQ86XP0 818 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 RASGRP4Q8TDF6 673 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 GLG1Q92896 1179 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 ZBTB10Q96DT7 871 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 UPF3BQ9BZI7 483 aaKnown RBP14.09□□□□□ -0.15
MSH5-209ENST00000450148 C6orf50Q9HD87 102 aa14.09□□□□□ -0.15
MSH5-209ENST00000450148 TTC3P53804 2025 aa14.08□□□□□ -0.15
MSH5-209ENST00000450148 INSRRP14616 1297 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 CIITAP33076 1130 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 HTRA4P83105 476 aaPredicted RBP14.08□□□□□ -0.16
MSH5-209ENST00000450148 PLCB4Q15147 1175 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 TAF2Q6P1X5 1199 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 ABHD15Q6UXT9 468 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 PLPPR4Q7Z2D5 763 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 REXO1Q8N1G1 1221 aaKnown RBP14.08□□□□□ -0.16
MSH5-209ENST00000450148 CCDC12Q8WUD4 166 aaPredicted RBP14.08□□□□□ -0.16
MSH5-209ENST00000450148 PPM1EQ8WY54 764 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 LENG9Q96B70 501 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 ZNF274Q96GC6 653 aaPredicted RBP14.08□□□□□ -0.16
MSH5-209ENST00000450148 RAD9AQ99638 391 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 SDF4Q9BRK5 362 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 LARP6Q9BRS8 491 aaKnown RBP14.08□□□□□ -0.16
MSH5-209ENST00000450148 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 VPS54Q9P1Q0 977 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 CYP46A1Q9Y6A2 500 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 MTCH2Q9Y6C9 303 aa14.08□□□□□ -0.16
MSH5-209ENST00000450148 COL4A6Q14031 1691 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 LINC01553A4QN01 128 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 GNA11P29992 359 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 ZNF76P36508 570 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 STAT5BP51692 787 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 NPY5RQ15761 445 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 CCDC85BQ15834 202 aaPredicted RBP14.07□□□□□ -0.16
MSH5-209ENST00000450148 KRT40Q6A162 431 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 MCTP2Q6DN12 878 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 CCDC60Q8IWA6 550 aaPredicted RBP14.07□□□□□ -0.16
MSH5-209ENST00000450148 DNAJB3Q8WWF6 145 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 ARNTL2Q8WYA1 636 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 SEPT8Q92599 483 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 TOP1MTQ969P6 601 aa14.07□□□□□ -0.16
MSH5-209ENST00000450148 RALGAPA2Q2PPJ7 1873 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 ATG2AQ2TAZ0 1938 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 RRN3P2A6NIE6 340 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 DDX39AO00148 427 aaKnown RBP14.06□□□□□ -0.16
MSH5-209ENST00000450148 IPO5O00410 1097 aaKnown RBP14.06□□□□□ -0.16
MSH5-209ENST00000450148 ATP4AP20648 1035 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 ERVK-21P61565 698 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 IGBP1P78318 339 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 AKAP17AQ02040 695 aaKnown RBP14.06□□□□□ -0.16
MSH5-209ENST00000450148 GRB10Q13322 594 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 LPIN1Q14693 890 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 FAM117BQ6P1L5 589 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 MYOCDQ8IZQ8 938 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 CCDC148Q8NFR7 591 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
MSH5-209ENST00000450148 TRAPPC12Q8WVT3 735 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 APBB2Q92870 758 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 ZBED2Q9BTP6 218 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 IFIH1Q9BYX4 1025 aaKnown RBP14.06□□□□□ -0.16
MSH5-209ENST00000450148 AZI2Q9H6S1 392 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 SH3GLB2Q9NR46 395 aa14.06□□□□□ -0.16
MSH5-209ENST00000450148 M0R2N6 131 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 AMHP03971 560 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 GHRP10912 638 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 FBXO47Q5MNV8 452 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 IL17RAQ96F46 866 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 AIFM3Q96NN9 605 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 AGO3Q9H9G7 860 aaKnown RBP14.05□□□□□ -0.16
MSH5-209ENST00000450148 SUGCTQ9HAC7 445 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 INSL6Q9Y581 213 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 PCDHA2Q9Y5H9 948 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 CDY2AQ9Y6F7 541 aa14.05□□□□□ -0.16
MSH5-209ENST00000450148 TCF20Q9UGU0 1960 aaKnown RBP14.05□□□□□ -0.16
MSH5-209ENST00000450148 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
MSH5-209ENST00000450148 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
MSH5-209ENST00000450148 SLC26A2P50443 739 aa14.04□□□□□ -0.16
MSH5-209ENST00000450148 MRPS6P82932 125 aaKnown RBP14.04□□□□□ -0.16
MSH5-209ENST00000450148 SETQ01105 290 aaPredicted RBP14.04□□□□□ -0.16
MSH5-209ENST00000450148 SSRP1Q08945 709 aaKnown RBP14.04□□□□□ -0.16
MSH5-209ENST00000450148 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
MSH5-209ENST00000450148 BICD2Q8TD16 824 aa14.04□□□□□ -0.16
MSH5-209ENST00000450148 ATP8B4Q8TF62 1192 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms