RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 USP17L11C9JVI0 530 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L18D6R9N7 530 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L22D6RA61 530 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L19D6RCP7 530 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L20D6RJB6 530 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 SCTRP47872 440 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L24Q0WX57 530 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 RASIP1Q5U651 963 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 CCDC174Q6PII3 467 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 PPP1R14CQ8TAE6 165 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 ZNF622Q969S3 477 aaKnown RBP eCLIP13.46□□□□□ -0.25
UBE3B-204ENST00000449510 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 HEMGNQ9BXL5 484 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 YY1AP1Q9H869 796 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 PLCB1Q9NQ66 1216 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 HOMER2Q9NSB8 354 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 RHOBTB3O94955 611 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 ALX1Q15699 326 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 IQCGQ9H095 443 aaKnown RBP13.46□□□□□ -0.25
UBE3B-204ENST00000449510 ECT2Q9H8V3 914 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 KIF9Q9HAQ2 790 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 PCDHA6Q9UN73 950 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 PCDHA8Q9Y5H6 950 aa13.46□□□□□ -0.25
UBE3B-204ENST00000449510 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 CAND2O75155 1236 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 HARSP12081 509 aaKnown RBP13.46□□□□□ -0.26
UBE3B-204ENST00000449510 PTK2Q05397 1052 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 TMED2Q15363 201 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 CDC37Q16543 378 aaPredicted RBP13.46□□□□□ -0.26
UBE3B-204ENST00000449510 LONRF1Q17RB8 773 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 IRF2BP1Q8IU81 584 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 PPFIBP2Q8ND30 876 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 BICD1Q96G01 975 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 SEMA6BQ9H3T3 888 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 FAM114A2Q9NRY5 505 aa13.46□□□□□ -0.26
UBE3B-204ENST00000449510 CFBP00751 764 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 PLA2G4BP0C869 781 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 MSH2P43246 934 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 CUL1Q13616 776 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 SLC29A2Q14542 456 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 DPP8Q6V1X1 898 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 LRRC34Q8IZ02 419 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 ANKS1AQ92625 1134 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 TSNAXIP1Q2TAA8 658 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 UNC13DQ70J99 1090 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 DUSP9Q99956 384 aaKnown RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 SH2D3AQ9BRG2 576 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 DCTN4Q9UJW0 460 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 PXDNQ92626 1479 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 LRRD1A4D1F6 860 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 POTEFA5A3E0 1075 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 USP17L5A8MUK1 530 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 CALUO43852 315 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 AFPP02771 609 aaKnown RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 PMS2P54278 862 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 POTEEQ6S8J3 1075 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 SUGP1Q8IWZ8 645 aaKnown RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 METTL13Q8N6R0 699 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
UBE3B-204ENST00000449510 XPO6Q96QU8 1125 aaKnown RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 ALG13Q9NP73 1137 aaKnown RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 THRAP3Q9Y2W1 955 aaKnown RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 RTCBQ9Y3I0 505 aaKnown RBP13.45□□□□□ -0.26
UBE3B-204ENST00000449510 ZNF263O14978 683 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 TOM1O60784 492 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 ANP32DO95626 131 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 TRIM49P0CI25 452 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 TRIM49CP0CI26 452 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 SMTNP53814 917 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 COASYQ13057 564 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 BIRC3Q13489 604 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 TNIP1Q15025 636 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 PBKQ96KB5 322 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■■■■ 33.9
UBE3B-204ENST00000449510 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 VCPKMTQ9H867 229 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 PRM3Q9NNZ6 103 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 CEP72Q9P209 647 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 RIMS1Q86UR5 1692 aaKnown RBP13.44□□□□□ -0.26
UBE3B-204ENST00000449510 SPAG7O75391 227 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 ERVK-9P63128 1117 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 SLC18A3Q16572 532 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-204ENST00000449510 KDM7AQ6ZMT4 941 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 PRCCQ92733 491 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-204ENST00000449510 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 IL17AQ16552 155 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 SH3RF3Q8TEJ3 882 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-204ENST00000449510 CELF1Q92879 486 aaKnown RBP13.44□□□□□ -0.26
UBE3B-204ENST00000449510 AK8Q96MA6 479 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 CYTH2Q99418 400 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms