RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 RRN3P2A6NIE6 340 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 CPLX1O14810 134 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 GTPBP6O43824 516 aaPredicted RBP22.41■■□□□ 1.18
VCP-203ENST00000448530 PPFIA3O75145 1194 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 GJB5O95377 273 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 ITGB3BPQ13352 177 aaPredicted RBP22.41■■□□□ 1.18
VCP-203ENST00000448530 NTRK3Q16288 839 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 FAM26DQ5JW98 314 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 MICALL1Q8N3F8 863 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 CHD7Q9P2D1 2997 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 TCEAL9Q9UHQ7 104 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 PRUNE2Q8WUY3 3088 aa22.41■■□□□ 1.18
VCP-203ENST00000448530 DDX39AO00148 427 aaKnown RBP22.4■■□□□ 1.18
VCP-203ENST00000448530 RPLP2P05387 115 aaKnown RBP22.4■■□□□ 1.18
VCP-203ENST00000448530 CYP3A4P08684 503 aa22.4■■□□□ 1.18
VCP-203ENST00000448530 STAT5BP51692 787 aa22.4■■□□□ 1.18
VCP-203ENST00000448530 TOB2Q14106 344 aaPredicted RBP22.4■■□□□ 1.18
VCP-203ENST00000448530 CPLX2Q6PUV4 134 aaKnown RBP22.4■■□□□ 1.18
VCP-203ENST00000448530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.4■■□□□ 1.182e-7■■■□□ 19.1
VCP-203ENST00000448530 RUFY4Q6ZNE9 571 aa22.4■■□□□ 1.18
VCP-203ENST00000448530 PLPPR4Q7Z2D5 763 aa22.4■■□□□ 1.18
VCP-203ENST00000448530 MYOCDQ8IZQ8 938 aa22.4■■□□□ 1.18
VCP-203ENST00000448530 APBB2Q92870 758 aa22.4■■□□□ 1.18
VCP-203ENST00000448530 ZNF274Q96GC6 653 aaPredicted RBP22.4■■□□□ 1.18
VCP-203ENST00000448530 UPF3BQ9BZI7 483 aaKnown RBP22.4■■□□□ 1.18
VCP-203ENST00000448530 TSPYL2Q9H2G4 693 aaPredicted RBP22.4■■□□□ 1.18
VCP-203ENST00000448530 FAM86B1E9PN63 330 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 BACH1O14867 736 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 FAM86B2P0C5J1 330 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 INSRRP14616 1297 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 SETQ01105 290 aaPredicted RBP22.39■■□□□ 1.17
VCP-203ENST00000448530 SSRP1Q08945 709 aaKnown RBP22.39■■□□□ 1.17
VCP-203ENST00000448530 FAM160B1Q5W0V3 765 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 RPAINQ86UA6 219 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 PCYT2Q99447 389 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 ZNF577Q9BSK1 485 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 IFIH1Q9BYX4 1025 aaKnown RBP22.39■■□□□ 1.17
VCP-203ENST00000448530 SH3GLB2Q9NR46 395 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 PDRG1Q9NUG6 133 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 VPS54Q9P1Q0 977 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 INSL6Q9Y581 213 aa22.39■■□□□ 1.17
VCP-203ENST00000448530 LCHNA4D1U4 455 aa22.38■■□□□ 1.17
VCP-203ENST00000448530 MBLAC1A4D2B0 266 aaPredicted RBP22.38■■□□□ 1.17
VCP-203ENST00000448530 RFXAPO00287 272 aa22.38■■□□□ 1.17
VCP-203ENST00000448530 IPO5O00410 1097 aaKnown RBP22.38■■□□□ 1.17
VCP-203ENST00000448530 SLC26A2P50443 739 aa22.38■■□□□ 1.17
VCP-203ENST00000448530 NLRP5P59047 1200 aa22.38■■□□□ 1.17
VCP-203ENST00000448530 DNAJB3Q8WWF6 145 aa22.38■■□□□ 1.17
VCP-203ENST00000448530 COL25A1Q9BXS0 654 aaPredicted RBP22.38■■□□□ 1.17
VCP-203ENST00000448530 POTEB3A0JP26 581 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 ARHGEF15O94989 841 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 CHRNA1P02708 482 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 PLCB4Q15147 1175 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 MARCH8Q5T0T0 291 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 MIS18BP1Q6P0N0 1132 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 POTEBQ6S5H4 581 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 CRYGNQ8WXF5 182 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 LARP6Q9BRS8 491 aaKnown RBP22.37■■□□□ 1.17
VCP-203ENST00000448530 TBC1D22BQ9NU19 505 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 THEGQ9P2T0 379 aa22.37■■□□□ 1.17
VCP-203ENST00000448530 TRANK1O15050 2925 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 IGLV3-22A0A075B6J6 115 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 M0QZ92 97 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 ADAMTS3O15072 1205 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 ATG7O95352 703 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 GHRP10912 638 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 STK3Q13188 491 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 PRR16Q569H4 304 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 IER5Q5VY09 327 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 RASGRP4Q8TDF6 673 aa22.36■■□□□ 1.17
VCP-203ENST00000448530 SYMPKQ92797 1274 aaKnown RBP22.36■■□□□ 1.17
VCP-203ENST00000448530 TGS1Q96RS0 853 aaKnown RBP22.36■■□□□ 1.17
VCP-203ENST00000448530 FAM49AQ9H0Q0 323 aaPredicted RBP22.36■■□□□ 1.17
VCP-203ENST00000448530 EPOPA6NHQ4 379 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 DEXIO95424 95 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 CCNE2O96020 404 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 MRPS6P82932 125 aaKnown RBP22.35■■□□□ 1.17
VCP-203ENST00000448530 SKIV2LQ15477 1246 aaKnown RBP22.35■■□□□ 1.17
VCP-203ENST00000448530 PDXDC2PQ6P474 469 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 ABHD15Q6UXT9 468 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 UIMC1Q96RL1 719 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 YME1L1Q96TA2 773 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 OSBPL7Q9BZF2 842 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 PRDM6Q9NQX0 595 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 ZNF302Q9NR11 478 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 MTUS1Q9ULD2 1270 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 MTCH2Q9Y6C9 303 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 CDY2AQ9Y6F7 541 aa22.35■■□□□ 1.17
VCP-203ENST00000448530 LINC01553A4QN01 128 aa22.34■■□□□ 1.17
VCP-203ENST00000448530 UPP2O95045 317 aa22.34■■□□□ 1.17
VCP-203ENST00000448530 CENPBP07199 599 aaPredicted RBP22.34■■□□□ 1.17
VCP-203ENST00000448530 POU3F3P20264 500 aaPredicted RBP22.34■■□□□ 1.17
VCP-203ENST00000448530 MGAT3Q09327 533 aa22.34■■□□□ 1.17
VCP-203ENST00000448530 MKRN4PQ13434 485 aaPredicted RBP22.34■■□□□ 1.17
VCP-203ENST00000448530 TJAP1Q5JTD0 557 aa22.34■■□□□ 1.17
VCP-203ENST00000448530 ZNF746Q6NUN9 644 aaPredicted RBP22.34■■□□□ 1.17
VCP-203ENST00000448530 CKAP2LQ8IYA6 745 aa22.34■■□□□ 1.17
VCP-203ENST00000448530 ATXN2LQ8WWM7 1075 aaKnown RBP22.34■■□□□ 1.17
VCP-203ENST00000448530 C22orf23Q9BZE7 217 aa22.34■■□□□ 1.17
VCP-203ENST00000448530 PCDHA2Q9Y5H9 948 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms