RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 NRCAMQ92823 1304 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 RFC2P35250 354 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 THPOP40225 353 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 KRT76Q01546 638 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 GUCY1B3Q02153 619 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 RBL2Q08999 1139 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 GRIK4Q16099 956 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 ZNF746Q6NUN9 644 aaPredicted RBP28.29■■■□□ 2.12
UFD1-204ENST00000447868 PLPPR4Q7Z2D5 763 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 NEK8Q86SG6 692 aa28.29■■■□□ 2.12
UFD1-204ENST00000447868 DDX25Q9UHL0 483 aaKnown RBP28.29■■■□□ 2.12
UFD1-204ENST00000447868 FAM205CA6NFA0 338 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 GAS7O60861 476 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 CD2BP2O95400 341 aaKnown RBP28.28■■■□□ 2.12
UFD1-204ENST00000447868 IGBP1P78318 339 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 PLCB4Q15147 1175 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 ZNF618Q5T7W0 954 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 FAM160B1Q5W0V3 765 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 SWSAP1Q6NVH7 229 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 MOXD1Q6UVY6 613 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 CCDC60Q8IWA6 550 aaPredicted RBP28.28■■■□□ 2.12
UFD1-204ENST00000447868 SLC5A5Q92911 643 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 FTOQ9C0B1 505 aaKnown RBP eCLIP28.28■■■□□ 2.12
UFD1-204ENST00000447868 ZNF302Q9NR11 478 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 SAMM50Q9Y512 469 aa28.28■■■□□ 2.12
UFD1-204ENST00000447868 IGKV6D-21A0A0A0MT36 114 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 BTBD18B2RXH4 712 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 PFKMP08237 780 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 LRCH2Q5VUJ6 765 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 SMAP1Q8IYB5 467 aaPredicted RBP28.27■■■□□ 2.12
UFD1-204ENST00000447868 DIS3L2Q8IYB7 885 aaKnown RBP28.27■■■□□ 2.12
UFD1-204ENST00000447868 HERVK_113Q902F9 699 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 TNFRSF25Q93038 417 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 MBOAT7Q96N66 472 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 RIT2Q99578 217 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 TEKT3Q9BXF9 490 aa28.27■■■□□ 2.12
UFD1-204ENST00000447868 CHMP2AO43633 222 aa28.26■■■□□ 2.11
UFD1-204ENST00000447868 SLC37A4O43826 429 aa28.26■■■□□ 2.11
UFD1-204ENST00000447868 CCNT1O60563 726 aaKnown RBP28.26■■■□□ 2.11
UFD1-204ENST00000447868 INSRRP14616 1297 aa28.26■■■□□ 2.11
UFD1-204ENST00000447868 ADAM17P78536 824 aa28.26■■■□□ 2.11
UFD1-204ENST00000447868 HMGN5P82970 282 aaKnown RBP28.26■■■□□ 2.11
UFD1-204ENST00000447868 FAM184AQ8NB25 1140 aa28.26■■■□□ 2.11
UFD1-204ENST00000447868 C8orf76Q96K31 380 aa28.26■■■□□ 2.11
UFD1-204ENST00000447868 CXXC1Q9P0U4 656 aaPredicted RBP28.26■■■□□ 2.11
UFD1-204ENST00000447868 POTEB3A0JP26 581 aa28.25■■■□□ 2.11
UFD1-204ENST00000447868 RBAK-RBAKDNI3L0D1 243 aa28.25■■■□□ 2.11
UFD1-204ENST00000447868 PSAPP07602 524 aa28.25■■■□□ 2.11
UFD1-204ENST00000447868 PDXDC2PQ6P474 469 aa28.25■■■□□ 2.11
UFD1-204ENST00000447868 POTEBQ6S5H4 581 aa28.25■■■□□ 2.11
UFD1-204ENST00000447868 MTIF3Q9H2K0 278 aaKnown RBP28.25■■■□□ 2.11
UFD1-204ENST00000447868 TUBE1Q9UJT0 475 aa28.25■■■□□ 2.11
UFD1-204ENST00000447868 PCDHA10Q9Y5I2 948 aa28.25■■■□□ 2.11
UFD1-204ENST00000447868 SZT2Q5T011 3432 aa28.25■■■□□ 2.11
UFD1-204ENST00000447868 ZBBXA8MT70 800 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 WDR64B1ANS9 1081 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 CTSHP09668 335 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 SLC26A2P50443 739 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 GPNMBQ14956 572 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 RASIP1Q5U651 963 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 TRAF7Q6Q0C0 670 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 RUFY4Q6ZNE9 571 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 IL27Q8NEV9 243 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 ETNPPLQ8TBG4 499 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 TNPO1Q92973 898 aaKnown RBP28.24■■■□□ 2.11
UFD1-204ENST00000447868 ZBTB10Q96DT7 871 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 TMX3Q96JJ7 454 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 UNC45AQ9H3U1 944 aa28.24■■■□□ 2.11
UFD1-204ENST00000447868 MYH9P35579 1960 aaKnown RBP28.23■■■□□ 2.11
UFD1-204ENST00000447868 NBNO60934 754 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 PSMD10O75832 226 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 GCFC2P16383 781 aaKnown RBP28.23■■■□□ 2.11
UFD1-204ENST00000447868 SAFBQ15424 915 aaKnown RBP eCLIP28.23■■■□□ 2.11
UFD1-204ENST00000447868 MARCH8Q5T0T0 291 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 FAM109BQ6ICB4 259 aaPredicted RBP28.23■■■□□ 2.11
UFD1-204ENST00000447868 PPP4R3AQ6IN85 833 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 TRMT1LQ7Z2T5 733 aaKnown RBP28.23■■■□□ 2.11
UFD1-204ENST00000447868 CKAP2LQ8IYA6 745 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 TET1Q8NFU7 2136 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 TRAPPC12Q8WVT3 735 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 NAP1L4Q99733 375 aaKnown RBP28.23■■■□□ 2.11
UFD1-204ENST00000447868 DISC1Q9NRI5 854 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 GABBR1Q9UBS5 961 aa28.23■■■□□ 2.11
UFD1-204ENST00000447868 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.22■■■□□ 2.11
UFD1-204ENST00000447868 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.22■■■□□ 2.11
UFD1-204ENST00000447868 RRN3P2A6NIE6 340 aa28.22■■■□□ 2.11
UFD1-204ENST00000447868 RSPH10B2B2RC85 870 aa28.22■■■□□ 2.11
UFD1-204ENST00000447868 PARNO95453 639 aaKnown RBP28.22■■■□□ 2.11
UFD1-204ENST00000447868 RSPH10BP0C881 870 aa28.22■■■□□ 2.11
UFD1-204ENST00000447868 ACTN1P12814 892 aa28.22■■■□□ 2.11
UFD1-204ENST00000447868 SMAD3P84022 425 aaKnown RBP28.22■■■□□ 2.11
UFD1-204ENST00000447868 LAMA2P24043 3122 aaKnown RBP28.22■■■□□ 2.11
UFD1-204ENST00000447868 ATP4AP20648 1035 aa28.21■■■□□ 2.11
UFD1-204ENST00000447868 MBTPS1Q14703 1052 aa28.21■■■□□ 2.11
UFD1-204ENST00000447868 ATP8B4Q8TF62 1192 aa28.21■■■□□ 2.11
UFD1-204ENST00000447868 MAFBQ9Y5Q3 323 aaPredicted RBP28.21■■■□□ 2.11
UFD1-204ENST00000447868 WDR81Q562E7 1941 aa28.2■■■□□ 2.11
UFD1-204ENST00000447868 MBLAC1A4D2B0 266 aaPredicted RBP28.2■■■□□ 2.1
UFD1-204ENST00000447868 GRXCR1A8MXD5 290 aa28.2■■■□□ 2.1
UFD1-204ENST00000447868 SLC34A2O95436 690 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms