RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 C12orf60Q5U649 245 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 ADGRA1Q86SQ6 560 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 CROCCP2Q86T23 111 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 RETREG3Q86VR2 466 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 DIS3L2Q8IYB7 885 aaKnown RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 ANKRD13AQ8IZ07 590 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 NOA1Q8NC60 698 aaKnown RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 GIMAP7Q8NHV1 300 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 CCDC47Q96A33 483 aaKnown RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 JAKMIP2Q96AA8 810 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 HHIPL1Q96JK4 782 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 ANKRD27Q96NW4 1050 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 MED15Q96RN5 788 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 KAT14Q9H8E8 782 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 PICK1Q9NRD5 415 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 SNX12Q9UMY4 172 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 LOC102724159A0A0B4J2E5 919 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 A0A1B0GUA9 196 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 BICDL2A1A5D9 508 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 MINDY4BA8MYZ0 360 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 POTECB2RU33 542 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 USP17L21D6R901 530 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 NDUFAB1O14561 156 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 SPTLC1O15269 473 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 ORC4O43929 436 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 DXOO77932 396 aaKnown RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 FAM107AO95990 144 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 GHRP10912 638 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 LONP1P36776 959 aaKnown RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 CCT5P48643 541 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 TOB1P50616 345 aaPredicted RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 FXR1P51114 621 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 HIRAP54198 1017 aaPredicted RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 SLC8A3P57103 927 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 ACTN3Q08043 901 aaPredicted RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 TCP10Q12799 353 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 BIRC3Q13489 604 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 PWP2Q15269 919 aaKnown RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 SPA17Q15506 151 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 GRIK5Q16478 980 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 KIAA0753Q2KHM9 967 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 AKNAD1Q5T1N1 836 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 OTUD7BQ6GQQ9 843 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 TMEM179Q6ZVK1 233 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 C16orf86Q6ZW13 317 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 CCDC84Q86UT8 332 aaPredicted RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 APLFQ8IW19 511 aaPredicted RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 IQCKQ8N0W5 287 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 MB21D1Q8N884 522 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 CCHCR1Q8TD31 782 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 ZNF384Q8TF68 577 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 SDR42E1Q8WUS8 393 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 CDCA5Q96FF9 252 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 CLIC6Q96NY7 704 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 ALS2CR12Q96Q35 445 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 LY9Q9HBG7 655 aa8.37□□□□□ -1.07
TRIM4-204ENST00000447480 MAGEC2Q9UBF1 373 aaPredicted RBP8.37□□□□□ -1.07
TRIM4-204ENST00000447480 DOCK1Q14185 1865 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 ATP8B3O60423 1300 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 TSPY2A6NKD2 308 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 TMEM88BA6NKF7 163 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 KCNJ18B7U540 433 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 H0YHG0 523 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 LAD1O00515 517 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 PPP1R12AO14974 1030 aaPredicted RBP8.36□□□□□ -1.07
TRIM4-204ENST00000447480 FOXP2O15409 715 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 PJA2O43164 708 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 PRPF3O43395 683 aaKnown RBP8.36□□□□□ -1.07
TRIM4-204ENST00000447480 TSPY3P0CV98 308 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 TSPY8P0CW00 308 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 GJA5P36382 358 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 ECE1P42892 770 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 ERVK-24P63145 666 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 GNGT1P63211 74 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 SATB1Q01826 763 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 PAK2Q13177 524 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 MTMR2Q13614 643 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 KCNJ12Q14500 433 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 MTF1Q14872 753 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 RTN1Q16799 776 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 CERKLQ49MI3 558 aaPredicted RBP8.36□□□□□ -1.07
TRIM4-204ENST00000447480 LACTB2Q53H82 288 aaPredicted RBP8.36□□□□□ -1.07
TRIM4-204ENST00000447480 TMEM67Q5HYA8 995 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 CFAP58Q5T655 872 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 ISM2Q6H9L7 571 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 FOXR1Q6PIV2 292 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 CRELD2Q6UXH1 353 aaPredicted RBP8.36□□□□□ -1.07
TRIM4-204ENST00000447480 NFXL1Q6ZNB6 911 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 RUFY4Q6ZNE9 571 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 ZNF507Q8TCN5 953 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 SYN2Q92777 582 aaPredicted RBP8.36□□□□□ -1.07
TRIM4-204ENST00000447480 SECISBP2LQ93073 1101 aaKnown RBP8.36□□□□□ -1.07
TRIM4-204ENST00000447480 CENPTQ96BT3 561 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 ERGIC2Q96RQ1 377 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 UBAC1Q9BSL1 405 aa8.36□□□□□ -1.07
TRIM4-204ENST00000447480 FAM117AQ9C073 453 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms