RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 HIBADHP31937 336 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 TRHRP34981 398 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 IL15P40933 162 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 RFX5P48382 616 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 PUM3Q15397 648 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 VGLL2Q8N8G2 317 aa9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 TDRD7Q8NHU6 1098 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 FRAT1Q92837 279 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 TMEM87BQ96K49 555 aa9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 MYOZ2Q9NPC6 264 aa9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 COPRSQ9NQ92 184 aa9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 A0A1B0GUL6 1792 aa9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 CNTNAP1P78357 1384 aa9.59□□□□□ -0.87
SMARCE1-206ENST00000447024 WTIPA6NIX2 430 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 PLIN1O60240 522 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 TPP2P29144 1249 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 ETV3P41162 512 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 LINC00310P59036 64 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 CCDC85BQ15834 202 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 TBC1D10BQ4KMP7 808 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 KRT26Q7Z3Y9 468 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 FBXO33Q7Z6M2 555 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 VPS37DQ86XT2 251 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 FTSJ3Q8IY81 847 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 DNAJB8Q8NHS0 232 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 TBC1D22AQ8WUA7 517 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 LPIN2Q92539 896 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 KCNN1Q92952 543 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 FAM84BQ96KN1 310 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 MEIS3Q99687 375 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 PUS3Q9BZE2 481 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 RNF32Q9H0A6 362 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 DUSP15Q9H1R2 295 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 CHMP4BQ9H444 224 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 SP110Q9HB58 689 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 SUGT1Q9Y2Z0 365 aa9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 LRRFIP2Q9Y608 721 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-206ENST00000447024 POLR2AP24928 1970 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 P4HBP07237 508 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 SLC5A1P13866 664 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 FGFR2P21802 821 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 KLRK1P26718 216 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 ECE1P42892 770 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 FKBP1BP68106 108 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 GAB4Q2WGN9 574 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 DEFB115Q30KQ5 88 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 LRRC24Q50LG9 513 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 SLC6A19Q695T7 634 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 MRIQ9BWK5 157 aa9.57□□□□□ -0.88
SMARCE1-206ENST00000447024 SNAP23O00161 211 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 SRGAP3O43295 1099 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 NUAK1O60285 661 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 SRFP11831 508 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 HDLBPQ00341 1268 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 CST9Q5W186 159 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 ATG9AQ7Z3C6 839 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 APOBEC3FQ8IUX4 373 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 FRMD6Q96NE9 622 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 GLIS2Q9BZE0 524 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 TRIT1Q9H3H1 467 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 GNL3LQ9NVN8 582 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 GGA3Q9NZ52 723 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 ABT1Q9ULW3 272 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 PPP2R3BQ9Y5P8 575 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 ZNF646O15015 1829 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 MAST3O60307 1309 aa9.56□□□□□ -0.88
SMARCE1-206ENST00000447024 COL1A1P02452 1464 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 SHTN1A0MZ66 631 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 WNT10BO00744 389 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 MYO1BO43795 1136 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 FRAT2O75474 233 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 CELF2O95319 508 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 LDHBP07195 334 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 HTRA3P83110 453 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 DLGAP5Q15398 846 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 AGMOQ6ZNB7 445 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 SAPCD2Q86UD0 394 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 TMEM57Q8N5G2 664 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 C2orf69Q8N8R5 385 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 ZBED3Q96IU2 234 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 DUSP13Q9UII6 198 aa9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 PDS5AQ29RF7 1337 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-206ENST00000447024 TRAF5O00463 557 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 EIF4BP23588 611 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 NF2P35240 595 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 MAP2K2P36507 400 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 BUD31P41223 144 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 GYG1P46976 350 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 MAP2K1Q02750 393 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 ATP2B3Q16720 1220 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 MFSD14BQ5SR56 506 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 KIAA0825Q8IV33 1275 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 MCATQ8IVS2 390 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 CERS5Q8N5B7 392 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 PDZD8Q8NEN9 1154 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 KLHDC4Q8TBB5 520 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 WDR66Q8TBY9 1149 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms