RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ABHD15Q6UXT9 468 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 RUFY4Q6ZNE9 571 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 DAGLBQ8NCG7 672 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 LENG9Q96B70 501 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 ZBTB10Q96DT7 871 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 CDX2Q99626 313 aaPredicted RBP16.75■□□□□ 0.27
USE1-202ENST00000445667 PHF20Q9BVI0 1012 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 OSBPL7Q9BZF2 842 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 NKX2-4Q9H2Z4 354 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 ZNF576Q9H609 170 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 MSRAQ9UJ68 235 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 YBX2Q9Y2T7 364 aaKnown RBP16.75■□□□□ 0.27
USE1-202ENST00000445667 BACH1O14867 736 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 FDPSP14324 419 aaKnown RBP16.74■□□□□ 0.27
USE1-202ENST00000445667 MARCH8Q5T0T0 291 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 GALNT17Q6IS24 598 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 CNKSR3Q6P9H4 555 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 PLPPR4Q7Z2D5 763 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 TET1Q8NFU7 2136 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 GTF3C6Q969F1 213 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 TBC1D22BQ9NU19 505 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 TRPC6Q9Y210 931 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 STXBP5LQ9Y2K9 1186 aa16.74■□□□□ 0.27
USE1-202ENST00000445667 TMEM265A0A087WTH1 108 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 IGKV6D-21A0A0A0MT36 114 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 MSH4O15457 936 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 XBP1P17861 261 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 GRIN2CQ14957 1233 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 NONOQ15233 471 aaKnown RBP eCLIP16.73■□□□□ 0.27
USE1-202ENST00000445667 RAB30Q15771 203 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 SWSAP1Q6NVH7 229 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 CCDC60Q8IWA6 550 aaPredicted RBP16.73■□□□□ 0.27
USE1-202ENST00000445667 FAM177A1Q8N128 213 aaPredicted RBP16.73■□□□□ 0.27
USE1-202ENST00000445667 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
USE1-202ENST00000445667 DBF4BQ8NFT6 615 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 OXER1Q8TDS5 423 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 TRAPPC12Q8WVT3 735 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 MYLIPQ8WY64 445 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 GJA10Q969M2 543 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 C22orf23Q9BZE7 217 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 TUBE1Q9UJT0 475 aa16.73■□□□□ 0.27
USE1-202ENST00000445667 POTEB3A0JP26 581 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 MBLAC1A4D2B0 266 aaPredicted RBP16.72■□□□□ 0.27
USE1-202ENST00000445667 RRN3P2A6NIE6 340 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 JAK2O60674 1132 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 BAIAP3O94812 1187 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 TDP2O95551 362 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 WDR5P61964 334 aaKnown RBP16.72■□□□□ 0.27
USE1-202ENST00000445667 INF2Q27J81 1249 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 FAM160B1Q5W0V3 765 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 ZNF746Q6NUN9 644 aaPredicted RBP16.72■□□□□ 0.27
USE1-202ENST00000445667 MIS18BP1Q6P0N0 1132 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 POTEBQ6S5H4 581 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 KRT25Q7Z3Z0 450 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 TMCO2Q7Z6W1 182 aaPredicted RBP16.72■□□□□ 0.27
USE1-202ENST00000445667 DNAJB3Q8WWF6 145 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 SLC9A7Q96T83 725 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 KIF2CQ99661 725 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 ZNF302Q9NR11 478 aa16.72■□□□□ 0.27
USE1-202ENST00000445667 CAND2O75155 1236 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 CHRNA1P02708 482 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 ATP4AP20648 1035 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 KCNJ6P48051 423 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 FOSBP53539 338 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 DEFB103AP81534 67 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 ST3GAL1Q11201 340 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 IKBKEQ14164 716 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 TAF2Q6P1X5 1199 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 PDXDC2PQ6P474 469 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 TRMT1LQ7Z2T5 733 aaKnown RBP16.71■□□□□ 0.27
USE1-202ENST00000445667 PHOSPHO2Q8TCD6 241 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 WASF1Q92558 559 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 TNPO1Q92973 898 aaKnown RBP16.71■□□□□ 0.27
USE1-202ENST00000445667 SLC28A3Q9HAS3 691 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 PCDHA11Q9Y5I1 949 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 PCDHA10Q9Y5I2 948 aa16.71■□□□□ 0.27
USE1-202ENST00000445667 CYP3A7-CYP3A51PA0A087WV96 503 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 CCDC194A0A1B0GVG4 234 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 ABHD14A-ACY1A0A1B0GW23 586 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 CYP3A7P24462 503 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 SLC26A2P50443 739 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 KRT76Q01546 638 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 LETM2Q2VYF4 491 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 Q4G0T1 1027 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 PLEKHG4Q58EX7 1191 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 FAM26DQ5JW98 314 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 PIK3AP1Q6ZUJ8 805 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 HERC6Q8IVU3 1022 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 FAM49AQ9H0Q0 323 aaPredicted RBP16.7■□□□□ 0.26
USE1-202ENST00000445667 TCEAL9Q9UHQ7 104 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 LIMCH1Q9UPQ0 1083 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 SAMM50Q9Y512 469 aa16.7■□□□□ 0.26
USE1-202ENST00000445667 COL6A3P12111 3177 aa16.69■□□□□ 0.26
USE1-202ENST00000445667 KAT6AQ92794 2004 aa16.69■□□□□ 0.26
USE1-202ENST00000445667 CHMP2AO43633 222 aa16.69■□□□□ 0.26
USE1-202ENST00000445667 HBP1O60381 514 aa16.69■□□□□ 0.26
USE1-202ENST00000445667 GAS7O60861 476 aa16.69■□□□□ 0.26
USE1-202ENST00000445667 PSAPP07602 524 aa16.69■□□□□ 0.26
USE1-202ENST00000445667 EARS2Q5JPH6 523 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms